SRR1512468_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512468_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	717837
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	4101	0.5712996125861443	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3016	0.42015109279683277	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2898	0.4037128205985481	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1897	0.2642661216961511	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1402	0.1953089628982624	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1365	0.19015458941235963	No Hit
CCCATGTACTCTGCGTTGATACCAC	1364	0.19001528202084875	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1143	0.1592283484969429	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1093	0.1522629789213986	No Hit
GTCCTACAGTGGACATTTCTAAATT	1050	0.1462727610864305	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1011	0.14083977281750593	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1004	0.1398646210769297	No Hit
GAGTACATGGGAAGCAGTGGTATCA	879	0.12245119713806894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCTCT	40	0.0052749254	14.250209	9
GACGATG	50	0.0014980093	13.300196	7
TATACAC	245	0.0	13.185704	3
CTTATAC	175	0.0	12.498093	1
TAACCTG	55	0.0030605423	12.093616	5
TAGGACC	190	0.0	12.002686	4
GGCGAGG	230	0.0	11.97343	19
GTAGACC	105	2.7063834E-7	11.763717	3
ATCTCCG	205	0.0	11.585535	10
CCCACGA	200	0.0	11.395403	19
TTATACA	210	0.0	11.310478	2
TGTACCC	60	0.0058606644	11.0858135	5
CTAAGGC	60	0.0058637066	11.085041	3
GGGTAGG	95	1.342428E-5	11.010905	1
ATTACAC	95	1.3549412E-5	11.001695	3
GCCCACG	200	0.0	10.921354	18
ATTAGTG	70	0.0014869288	10.859572	5
TATTGGA	70	0.0014886595	10.858058	2
ACGAGAC	70	0.0014947307	10.852763	19
TCTCCGA	215	0.0	10.604807	11