SRR1512459_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512459_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2354206
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6998	0.29725521046161635	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5269	0.22381218975739592	No Hit
GTCCTACAGTGGACATTTCTAAATT	5175	0.2198193361158709	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	4833	0.2052921452073438	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4649	0.19747634658989058	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4629	0.19662680326190657	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4559	0.1936534016139624	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2742	0.11647239026661219	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2571	0.10920879481234863	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2513	0.1067451191611949	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTAT	55	1.9371824E-4	13.837957	1
TAGGACC	920	0.0	12.394008	4
ACTGCGT	90	7.475148E-6	11.609696	8
GGCGAGG	1405	0.0	11.423955	19
ATCGTGC	70	0.0014934136	10.85582	8
AGGACGT	2870	0.0	10.826403	5
GGTTTAC	100	2.3622335E-5	10.464955	1
GGACGTG	2925	0.0	10.4570675	6
TGTAGGA	2960	0.0	10.400696	2
AGGACCT	1810	0.0	10.342034	5
AGGCGTG	195	1.4551915E-11	10.22974	7
TGGCGAG	2960	0.0	10.203537	18
GAGGCGT	75	0.002650648	10.132314	6
ATTTAGA	960	0.0	10.108196	1
TTTAGAA	1075	0.0	10.076402	2
CGGTAGG	85	6.5094756E-4	10.073219	1
TTAGGAC	1850	0.0	10.066846	3
CTGTAGG	3000	0.0	9.989276	1
GGACCTG	1880	0.0	9.953785	6
GTAGGAC	3055	0.0	9.952859	3