SRR1512457_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512457_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1558931
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	5710	0.36627663443731634	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3985	0.2556238858551148	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3950	0.2533787576230122	No Hit
GTACATGGGAAGCAGTGGTATCAAC	3557	0.22816917490254537	No Hit
CCCATGTACTCTGCGTTGATACCAC	2631	0.16876949653320128	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1901	0.12194253626363193	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1749	0.11219226508421476	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1686	0.10815103426643001	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1654	0.10609834559707901	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1652	0.1059700525552446	No Hit
GTCCTACAGTGGACATTTCTAAATT	1629	0.10449468257414858	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGAAT	50	0.001499684	13.299843	8
AAGGCGT	85	3.946685E-6	12.293183	6
TAGGGTG	140	6.7848305E-10	11.5378	5
TAGTATC	60	0.005876189	11.083202	7
GGCGAGG	330	0.0	10.934001	19
TAGGACT	210	0.0	10.406642	4
TACTAGC	75	0.0026443147	10.13484	2
ACCGTGG	75	0.0026478372	10.133214	8
GTCCTAC	1010	0.0	10.079116	1
TAGGACC	360	0.0	9.501718	4
ATTAGGC	80	0.0045099254	9.501412	3
TGTAGGA	1070	0.0	9.501412	2
TGGCGAG	890	0.0	9.4953165	18
GTCCTAA	545	0.0	9.252081	1
AGGACGT	945	0.0	9.250349	5
GGACGTG	935	0.0	9.245286	6
TAGGCTG	185	6.670234E-9	9.244913	5
GTTCCTA	165	1.0410622E-7	9.225631	1
CCTATAC	125	2.7481821E-5	9.121355	3
GACGTGA	490	0.0	9.112137	7