SRR1512452_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512452_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	894512
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	5015	0.560640885756703	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3594	0.4017833187257409	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3484	0.38948611086268264	No Hit
GTACATGGGAAGCAGTGGTATCAAC	2189	0.24471443647486002	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1669	0.18658218112222083	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1608	0.17976282039816124	No Hit
GTCCTACAGTGGACATTTCTAAATT	1569	0.1754029012467133	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1541	0.17227270288157118	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1490	0.16657127014506234	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1458	0.16299390058489993	No Hit
CCCATGTACTCTGCGTTGATACCAC	1417	0.15841039583594185	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1199	0.13403956570733538	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1050	0.11738243869282916	No Hit
GAGTACATGGGAAGCAGTGGTATCA	1013	0.11324610513889137	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	390	0.0	12.181495	4
GACTGCG	55	0.0030667617	12.090873	7
TGTAGGA	970	0.0	12.047704	2
GTAGGAC	980	0.0	12.021718	3
ATAGGAC	105	2.710858E-7	11.763186	3
TCTTATA	105	2.710858E-7	11.763186	2
TCGTCAA	105	2.714787E-7	11.761871	10
CTGTAGG	1005	0.0	11.646373	1
CAAGTCG	100	1.9277377E-6	11.399329	6
AAGTCGT	110	4.958747E-7	11.22724	7
AGGACCT	695	0.0	11.073768	5
GGACCTG	655	0.0	11.022252	6
AGGACGT	900	0.0	10.9795885	5
GGACGTG	895	0.0	10.720039	6
GTCTAGA	80	3.7093804E-4	10.70543	1
GGATAGA	80	3.7093804E-4	10.70543	1
GTCCTAA	510	0.0	10.635461	1
GACGTGG	465	0.0	10.623625	7
GTATAAA	90	9.3435956E-5	10.573265	1
ATGGCAA	845	0.0	10.564471	17