SRR1512450_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512450_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1822020
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6123	0.336055586656568	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4393	0.24110602518084323	No Hit
CTGTAGGACGTGGAATATGGCAAGA	4285	0.2351785381060581	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4199	0.23045850210206253	No Hit
GTCCTACAGTGGACATTTCTAAATT	3773	0.20707785864041006	No Hit
GTACATGGGAAGCAGTGGTATCAAC	3728	0.20460807235924963	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3572	0.19604614658456002	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3564	0.19560707346790926	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2131	0.1169581014478436	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2107	0.11564088209789136	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2086	0.11448831516668315	No Hit
CCCATGTACTCTGCGTTGATACCAC	2050	0.11251248614175474	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	815	0.0	11.075667	4
GGCGAGG	1125	0.0	10.806141	19
GTTAGAC	80	3.764906E-4	10.689477	3
CAGCGTT	80	3.7744688E-4	10.686543	9
GGACGTT	80	3.7744688E-4	10.686543	6
AAGGCGT	80	3.7744688E-4	10.686543	6
TTAGGAC	1460	0.0	10.477964	3
AATGTCC	685	0.0	10.400528	8
AGGACGT	2230	0.0	10.311607	5
TAGGACT	305	0.0	10.28059	4
TGGCGAG	2480	0.0	10.1103325	18
AGGACCT	1580	0.0	10.103412	5
TAAGACC	245	0.0	10.083497	4
GGACGTG	2190	0.0	10.063026	6
ACCGTGC	85	6.5995345E-4	10.057923	8
AAATGTC	700	0.0	10.041958	7
GTCCTAA	1280	0.0	10.032678	1
TGTCCAC	735	0.0	9.951489	10
TCGAACT	105	4.116747E-5	9.949851	19
TAGAAAT	755	0.0	9.942236	4