SRR1512415_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512415_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3250511
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	10841	0.3335167916675255	No Hit
CTGTAGGACGTGGAATATGGCAAGA	9661	0.2972148071487837	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	8542	0.26278945064329884	No Hit
GTCCTACAGTGTGCATTTCTCATTT	7878	0.2423618932530916	No Hit
GTATCAACGCAGAGTACTTTTTTTT	7420	0.22827180095683416	No Hit
CTTTAGGACGTGAAATATGGCGAGG	6916	0.21276654655221902	No Hit
CTGTAGGACCTGGAATATGGCGAGA	5083	0.1563754129735294	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4635	0.1425929646138715	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4183	0.12868745867957376	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3830	0.11782762771761117	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	3300	0.10152249907783731	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	2365	0.0	14.556586	4
AGACCGT	80	1.3157478E-7	14.226854	6
GGTATCA	1620	0.0	13.90136	1
TATTGCG	105	1.3969839E-9	13.555051	16
CGATAAA	60	2.946477E-4	13.16971	1
AGGACCT	4045	0.0	12.215653	5
GGACCTG	4075	0.0	11.800434	6
TGTAGGA	6755	0.0	11.737212	2
GTGTAGG	785	0.0	11.450098	1
GTAGGAC	6695	0.0	11.374936	3
GGCGAGG	2055	0.0	11.296274	19
CTGTAGG	6100	0.0	11.14028	1
GTCCTAC	5825	0.0	11.072731	1
GTCCTAG	580	0.0	11.069368	1
TAGAAAT	1295	0.0	11.0583725	4
GACGTGG	2990	0.0	11.007176	7
AATGTCC	1275	0.0	10.824576	8
CTAGGAC	570	0.0	10.8149	3
TGGCGAG	5570	0.0	10.697503	18
TCCTACA	6655	0.0	10.68802	2