SRR1512412_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512412_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2047957
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6953	0.3395090814895039	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5851	0.2856993579455037	No Hit
GTCCTACAGTGGACATTTCTAAATT	5490	0.26807203471557267	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5326	0.2600640540792605	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4811	0.23491704171523134	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4728	0.2308642222468538	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4438	0.2167037686826432	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3055	0.14917305392642521	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2723	0.13296177605291518	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2467	0.12046151359623274	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2173	0.10610574343113649	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2071	0.1011251701085521	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2060	0.1005880494561165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1410	0.0	13.903838	1
ACCGCTC	50	0.0015018082	13.297674	8
TAGGACC	975	0.0	12.482421	4
TTCCGAA	70	1.09725355E-4	12.207081	16
CAAGTCG	190	0.0	11.997902	6
TCCAACG	95	1.0477361E-6	11.992922	18
AAGTCGT	215	0.0	11.928145	7
ATACGGC	90	7.514913E-6	11.603978	15
GGCGAGG	1215	0.0	11.252618	19
CGAGTAA	60	0.0058843894	11.081396	10
AATGTCC	870	0.0	11.026807	8
AAATGTC	855	0.0	10.998077	7
AGGACGT	2990	0.0	10.907279	5
GCGATTT	70	0.0014939299	10.855245	11
AGTCGTC	245	0.0	10.855245	8
GGACGTG	3000	0.0	10.828106	6
GACGTGG	1620	0.0	10.788237	7
CTGTAGG	3115	0.0	10.754029	1
TGTAGGA	3175	0.0	10.691775	2
CGATTTC	80	3.7812878E-4	10.684587	12