SRR1512411_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512411_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1931936
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	8863	0.45876260911334543	No Hit
GGTATCAACGCAGAGTACTTTTTTT	6018	0.3115010021035894	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5598	0.2897611515081245	No Hit
GTCCTACAGTGGACATTTCTAAATT	5374	0.27816656452387656	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5124	0.2652261772646713	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	4717	0.24415922680668511	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4375	0.2264567770360923	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3715	0.19229415467179037	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2819	0.14591580673479868	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2770	0.14337949083199444	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2355	0.12189844798171368	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1987	0.10285019793616353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1455	0.0	13.992246	1
GCCGGTT	50	0.0015019813	13.297408	11
TAGGACC	1015	0.0	13.205756	4
CCGGTTT	60	4.100453E-4	12.663871	12
TACACCG	70	1.0842017E-4	12.222664	5
AATCCCG	140	5.2750693E-11	12.208428	19
CACCTTT	755	0.0	12.074303	14
GTATTAG	150	1.2732926E-11	12.050332	1
GTACCGT	65	8.029373E-4	11.691543	6
TGGCGAA	90	7.5030202E-6	11.605544	18
CTAGGAC	280	0.0	11.543328	3
AGGCGTG	140	6.82121E-10	11.534063	7
CGAAATC	140	6.8394E-10	11.532272	13
TAGGACT	430	0.0	11.27488	4
TGTAGGA	3110	0.0	11.157456	2
ATAGGAC	300	0.0	11.09065	3
ACCTTTT	805	0.0	11.088423	15
ACACCGT	95	1.3615438E-5	10.99928	6
GGCGTGC	95	1.36271665E-5	10.998426	8
AGTCGTC	260	0.0	10.95997	8