SRR1512391_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512391_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2410912
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	7607	0.31552375200753907	No Hit
CTGTAGGACGTGGAATATGGCAAGA	7006	0.29059542612919925	No Hit
GTATCAACGCAGAGTACTTTTTTTT	6524	0.27060299173093005	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	6101	0.2530577640328639	No Hit
CTTTAGGACGTGAAATATGGCGAGG	5217	0.21639114160948222	No Hit
GTCCTACAGTGTGCATTTCTCATTT	4310	0.178770523353818	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3910	0.1621792914880344	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3642	0.1510631661379594	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2894	0.12003756254894413	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2597	0.10771857288859983	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2565	0.10639127433933716	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGGCAC	25	0.006092595	18.967697	3
TAGGACC	1370	0.0	13.983193	4
TATACCG	50	0.0015190783	13.277664	5
GGTATCA	1305	0.0	13.16085	1
AGGACCT	2520	0.0	11.967963	5
GTGTAGG	500	0.0	11.844765	1
GTCCTAC	3805	0.0	11.595729	1
TAGAAAT	945	0.0	11.440594	4
GTATTAG	285	0.0	11.429159	1
GGACCTG	2505	0.0	11.396236	6
AAATGTC	895	0.0	11.338705	7
TCCTACA	4255	0.0	11.233747	2
AATGTCC	910	0.0	11.21999	8
GTCCTAA	1820	0.0	11.172259	1
TGCACCG	85	5.4173677E-5	11.157701	5
GACGTGG	2065	0.0	11.114706	7
GGCGAGG	1605	0.0	11.102787	19
CTAGGAC	385	0.0	11.085017	3
CACCGCG	60	0.0059502907	11.064951	7
GAAATGT	985	0.0	10.976688	6