SRR1512359_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512359_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2280506
Sequences flagged as poor quality	0
Sequence length	25
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6825	0.2992756870624326	No Hit
GTCCTACAGTGGACATTTCTAAATT	6289	0.27577213127262107	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5910	0.2591530125331834	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5550	0.24336704222659356	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4482	0.19653533031704368	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4311	0.18903699442141347	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3908	0.1713654776615365	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3430	0.15040521708778667	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2610	0.11444828472277643	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2485	0.1089670450329883	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACTGCG	80	1.3162935E-7	14.22585	7
AAGACCG	55	1.9899328E-4	13.794154	5
TAGGACC	1110	0.0	13.327548	4
GGTATCA	1380	0.0	13.107531	1
TCCAACG	145	7.2759576E-12	12.411303	18
ACTGCGG	80	3.0195677E-5	11.815266	8
GGCGAGG	1410	0.0	11.690644	19
CCCGTAC	140	6.9485395E-10	11.520991	16
CGGACAT	75	2.1183677E-4	11.374409	10
GTGTAGG	475	0.0	11.236964	1
CACCTTT	820	0.0	11.224453	14
CCGTACA	145	1.2441888E-9	11.124207	17
TTCGCAT	60	0.0059312438	11.069676	17
TGTAGGA	3560	0.0	11.054938	2
CGCCCTA	215	0.0	11.032413	16
CCACCTT	785	0.0	10.8747	13
AGGACGT	3355	0.0	10.769616	5
CCCCGTA	150	2.1773303E-9	10.753876	15
CTGTAGG	3255	0.0	10.749818	1
CCCGTTT	150	2.2064341E-9	10.744865	12