SRR1512346_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512346_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2237094
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	7554	0.3376702096559197	No Hit
GTATCAACGCAGAGTACTTTTTTTT	7552	0.33758080795889667	No Hit
CTGTAGGACGTGGAATATGGCAAGA	7158	0.31996867364536313	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	6532	0.2919859424771601	No Hit
CTTTAGGACGTGAAATATGGCGAGG	6043	0.27012722755503343	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4556	0.20365706581842338	No Hit
GTCCTACAGTGTGCATTTCTCATTT	4258	0.19033621296199443	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4151	0.18555322217126327	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3170	0.14170168978147543	No Hit
CTGTAGGACCTGGAATATGGCGAGA	3041	0.1359352803234911	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2666	0.11917246213167618	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2407	0.10759494236719602	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	2392	0.10692442963952341	No Hit
GAATATGGCAAGAAAACTGAAAATC	2300	0.10281195157646483	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1165	0.0	13.551351	1
TAGGACC	1215	0.0	13.374873	4
TAGTACG	70	1.0878877E-4	12.218399	4
TGTTCGG	55	0.0030717137	12.089571	10
TAGAAAT	980	0.0	11.927485	4
GAAATGT	995	0.0	11.558725	6
AAATGTC	955	0.0	11.44595	7
AATGTCC	970	0.0	11.3669405	8
GGACCTG	2365	0.0	11.25316	6
ATTTAGA	1000	0.0	11.222315	1
AGGACCT	2410	0.0	11.1987915	5
ATGTCCA	1025	0.0	11.126196	9
GACGAGC	60	0.0058535277	11.0893	8
CGAATGG	60	0.0059054093	11.076161	19
CACCTTT	875	0.0	11.067862	14
CCACCTT	905	0.0	11.020634	13
TGTCCAC	1040	0.0	10.960325	10
ACCGAGT	70	0.0014851623	10.8629875	8
GTATCAA	2810	0.0	10.83039	1
GGCGAGG	1685	0.0	10.6488905	19