SRR1512342_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512342_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1488945
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7374	0.4952499924443146	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4736	0.3180775649872897	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4443	0.2983992021196216	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	2614	0.1755605479047245	No Hit
GTCCTACAGTGGACATTTCTAAATT	2469	0.16582210894290925	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2404	0.1614566018220955	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2263	0.15198680945233034	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2212	0.1485615654036919	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2169	0.14567361453915356	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1652	0.11095104251668128	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	355	0.0	14.184587	4
GGTATCA	1010	0.0	14.109437	1
CTTATAC	130	2.6066118E-9	11.694323	3
CTAATAC	130	2.6066118E-9	11.694323	3
AGGACCT	795	0.0	10.874987	5
GCCGGTT	70	0.0014975977	10.8516865	11
GTATCAA	2435	0.0	10.690337	1
AGTACCG	80	3.767974E-4	10.688259	5
AGACCGT	80	3.7691495E-4	10.687899	6
GGCGAGG	600	0.0	10.453919	19
AAGTCGT	100	2.3962852E-5	10.450743	7
TAGGACA	450	0.0	10.345529	4
GTAGGAC	1415	0.0	10.273855	3
ATAGTAC	85	6.5821165E-4	10.060557	3
TGTAGGA	1445	0.0	10.060218	2
CCTTATA	135	6.426726E-7	9.853218	2
TTAGGAC	900	0.0	9.818358	3
CTGTAGG	1420	0.0	9.701067	1
GTCCTAC	1185	0.0	9.700784	1
CACCTTT	510	0.0	9.693507	14