SRR1512332_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512332_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2306884
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	7853	0.3404159030102944	No Hit
GTATCAACGCAGAGTACTTTTTTTT	7458	0.3232932388451262	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	7091	0.3073843331524255	No Hit
CTGTAGGACGTGGAATATGGCAAGA	7013	0.3040031488362657	No Hit
CTTTAGGACGTGAAATATGGCGAGG	6158	0.26694016690912936	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4155	0.18011308761082048	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4085	0.17707869142965144	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3885	0.1684089880548827	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3217	0.13945217878315513	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2747	0.11907837585244858	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2746	0.11903502733557475	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2623	0.11370315976009196	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	2438	0.10568368413843088	No Hit
GAATATGGCAAGAAAACTGAAAATC	2434	0.10551029007093553	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACGTTA	35	0.0021708068	16.28551	7
TAGACCG	40	0.005281322	14.249511	5
GGTATCA	1330	0.0	13.355229	1
TAGGACC	1245	0.0	13.352955	4
AATGTCC	920	0.0	12.8891945	8
AAATGTC	960	0.0	12.171721	7
ATGTCCA	1035	0.0	11.917159	9
AGTCGTC	275	0.0	11.7287	8
GGCGAGG	1720	0.0	11.383964	19
GGACCTG	2355	0.0	11.254145	6
CAAGTCG	280	0.0	11.195799	6
TGTCCAC	1065	0.0	11.142812	10
AGGACCT	2470	0.0	11.115003	5
TAGAAAT	1070	0.0	11.097749	4
TAAGACG	60	0.0058786096	11.082952	4
GTCCGCT	60	0.0058986554	11.077885	11
CCACCTT	990	0.0	11.037378	13
AAGTCGT	305	0.0	10.901502	7
GAAATGT	1065	0.0	10.882018	6
TGTAGGA	4185	0.0	10.82782	2