Basic Statistics
Measure | Value |
---|---|
Filename | SRR1512319_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2342837 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 7824 | 0.333954090702853 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 5572 | 0.23783131306189886 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 5554 | 0.23706301377347205 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 5101 | 0.21772748168139738 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 4838 | 0.20650177541160566 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 4782 | 0.20411151095872226 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 4696 | 0.20044074769179418 | No Hit |
GTCCTACAGTGTGCATTTCTCATTT | 3038 | 0.12967184656892478 | No Hit |
CTGAAGGACCTGGAATATGGCGAGA | 2727 | 0.11639734219666158 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1380 | 0.0 | 13.026961 | 1 |
TACCGAC | 60 | 4.079527E-4 | 12.671766 | 7 |
TAGGACC | 860 | 0.0 | 11.822505 | 4 |
GATATAC | 440 | 0.0 | 11.6735115 | 1 |
TCTATAC | 250 | 0.0 | 11.40264 | 3 |
TCCAACG | 180 | 3.6379788E-12 | 11.076908 | 18 |
CCAACGA | 150 | 2.1536835E-9 | 10.760656 | 19 |
GGCGAGG | 1185 | 0.0 | 10.736618 | 19 |
GTATCAA | 2990 | 0.0 | 10.720602 | 1 |
CTAGGAC | 400 | 0.0 | 10.689976 | 3 |
TAGACTG | 255 | 0.0 | 10.434235 | 5 |
AGGACCT | 1805 | 0.0 | 10.423911 | 5 |
TGTAGGA | 2855 | 0.0 | 10.317625 | 2 |
GGACCTG | 1745 | 0.0 | 10.239078 | 6 |
GTATTAT | 255 | 0.0 | 10.071265 | 1 |
ATTGCGA | 85 | 6.630856E-4 | 10.052993 | 17 |
TCGAACT | 180 | 3.9835868E-10 | 10.022179 | 19 |
GCCTCGA | 180 | 3.9835868E-10 | 10.021965 | 16 |
GTAGGAC | 2845 | 0.0 | 10.019895 | 3 |
AGGACGT | 2990 | 0.0 | 10.011107 | 5 |