SRR1512298_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512298_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2120509
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6959	0.3281759237994274	No Hit
GTCCTACAGTGGACATTTCTAAATT	5218	0.2460729947385274	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5094	0.2402253421230469	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	4604	0.21711768259413186	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4410	0.20796893576023492	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4397	0.20735587540538616	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4016	0.18938849115943387	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3591	0.16934613340476273	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2738	0.12911994242891683	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2351	0.11086960724995744	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2198	0.10365435845827584	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACCGA	45	6.7474134E-4	14.782496	6
TAGGACC	1095	0.0	13.622781	4
GGGCCGT	80	1.9932231E-6	13.06667	6
GGTATCA	1255	0.0	13.033613	1
TGGACCG	80	2.8629975E-5	11.876829	5
TAGGCTA	105	2.7160422E-7	11.763716	5
TAGAAAT	760	0.0	11.126451	4
AGGACCT	1985	0.0	11.104984	5
CGCCCTA	215	0.0	11.041698	16
TCCAACG	250	0.0	11.015199	18
GTCCTAA	1350	0.0	10.918879	1
TAGACCG	70	0.0014898751	10.858814	5
TTCTACG	70	0.0014907552	10.858046	2
GGACCTG	1905	0.0	10.824977	6
GTCGAGG	125	2.2545282E-7	10.635365	19
ATTTAGA	780	0.0	10.607298	1
TGTAGGA	3045	0.0	10.577234	2
GGCGAGG	1070	0.0	10.560817	19
CCAACGT	135	5.7263605E-8	10.550957	19
GAAATGT	795	0.0	10.51908	6