SRR1512294_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512294_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1701267
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	5716	0.335984886558077	No Hit
GTATCAACGCAGAGTACTTTTTTTT	5630	0.3309298305321857	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5233	0.30759428120336196	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5054	0.29707271110296035	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4297	0.2525764621308707	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3303	0.19414941922696438	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3295	0.19367918145711402	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3264	0.1918570100989439	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2372	0.13942549876062957	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2300	0.13519335883197642	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2101	0.12349619430694887	No Hit
ATTTAGAAATGTCCACTGTAGGACG	2020	0.11873503688721405	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1721	0.10115990023905712	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGACGG	80	1.2875171E-7	14.251019	5
GTGCGTT	40	0.005301722	14.240925	11
TAGGACC	955	0.0	14.226148	4
ATACCGA	50	0.00149917	13.300558	6
GGTATCA	1000	0.0	13.016315	1
AATGTCC	775	0.0	11.868738	8
GTCCTAG	250	0.0	11.401152	1
GTCTTGT	175	1.8189894E-12	11.401152	1
TAATACT	235	0.0	11.319959	4
AGGACCT	1775	0.0	11.24024	5
CCACCTT	665	0.0	11.144641	13
AAATGTC	810	0.0	11.143101	7
GTATTAG	180	3.6379788E-12	11.084453	1
TGTAGGA	3105	0.0	11.076476	2
GGACCTG	1775	0.0	10.865245	6
GTCCTAA	1325	0.0	10.827509	1
GTCCTAC	2705	0.0	10.818098	1
CACCTTT	695	0.0	10.807952	14
TGTCCAC	860	0.0	10.707345	10
ACCTTTT	720	0.0	10.696794	15