SRR1512292_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512292_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1741746
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7408	0.4253203394754459	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4727	0.27139433648763944	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4569	0.26232297935519877	No Hit
GTCCTACAGTGGACATTTCTAAATT	4279	0.24567302006147854	No Hit
CTGTAGGACGTGGAATATGGCAAGA	4274	0.2453859517977937	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3801	0.21822929405320868	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3428	0.19681400158232026	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2173	0.12475986739742763	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2031	0.11660712870877844	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1876	0.10770801253454866	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1793	0.10294267935738047	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1280	0.0	14.560504	1
GTACTAG	115	6.983282E-8	11.576053	1
TAGGACC	760	0.0	11.128062	4
CGTGCGC	60	0.005880437	11.082245	10
GGCGAGG	1050	0.0	10.669318	19
GACGTGG	1225	0.0	10.32009	7
TGTAGGA	2430	0.0	10.245619	2
GTATCAA	2635	0.0	10.140421	1
GCGCCCA	75	0.0026620268	10.12681	19
GTAATAC	85	6.5771263E-4	10.061593	3
AGGACGT	2540	0.0	9.951843	5
GTAGGAC	2380	0.0	9.941812	3
CTGTAGG	2420	0.0	9.901831	1
GTTTTAG	125	2.539089E-6	9.889256	1
TTTAGAA	725	0.0	9.830291	2
GGACGTG	2465	0.0	9.794274	6
ATTTAGA	680	0.0	9.788573	1
TTAGGAC	1515	0.0	9.784871	3
TGGCGAG	2135	0.0	9.738459	18
CGCCCTA	195	1.6552804E-10	9.737318	16