SRR1512284_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512284_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2467196
Sequences flagged as poor quality	0
Sequence length	25
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	7887	0.31967464279287094	No Hit
CTGTAGGACGTGGAATATGGCAAGA	6982	0.28299332521615633	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5476	0.2219523702210931	No Hit
GTATCAACGCAGAGTACTTTTTTTT	5105	0.2069150566067714	No Hit
GTCCTACAGTGTGCATTTCTCATTT	4727	0.19159402009406631	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4417	0.17902914887994306	No Hit
CTGTAGGACCTGGAATATGGCGAGA	3433	0.13914581573575832	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3174	0.1286480684955715	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2824	0.11446192357640009	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2633	0.10672034163479512	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGGACC	1400	0.0	13.638818	4
CCGCGCG	50	0.0015163266	13.280882	9
CCAACGA	210	0.0	13.128222	19
GGTATCA	1095	0.0	13.013516	1
TATTGCG	70	1.0810018E-4	12.226814	16
AAGCGTG	55	0.003069638	12.09074	7
ACCGTCT	95	1.062459E-6	11.979341	8
TGTAGGA	4020	0.0	11.91101	2
TCCAACG	355	0.0	11.777601	18
AGGACCT	2450	0.0	11.709802	5
AACCGTC	65	8.027267E-4	11.692144	7
TTAGACT	180	0.0	11.610713	4
GTAGGAC	3925	0.0	11.424742	3
GGACCTG	2345	0.0	11.3827095	6
CTGTAGG	3775	0.0	11.34951	1
GTCCTAC	3745	0.0	11.110659	1
GTGTAGG	600	0.0	11.083179	1
TTAGACG	60	0.005878803	11.082954	4
GTGCGAT	60	0.005904693	11.076412	11
GGCGAGG	1360	0.0	11.044483	19