SRR1512265_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512265_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2176158
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTAGGACGTGGAATATGGCAAGA	7085	0.3255737864621962	No Hit
GTCCTACAGTGGACATTTCTAAATT	6985	0.32097853188968817	No Hit
GTATCAACGCAGAGTACTTTTTTTT	6156	0.28288387148359634	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5391	0.24773017400390962	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4824	0.22167508057778892	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3934	0.18077731488246718	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3816	0.17535491448690765	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3702	0.17011632427424847	No Hit
CTGAAGGACCTGGAATATGGCGAGA	3044	0.1398795491871454	No Hit
CTGTAGGACCTGGAATATGGCGAGA	3020	0.13877668808974347	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	2244	0.10311751260708092	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGATA	35	0.0021709953	16.285242	10
TCCAACG	215	0.0	14.130678	18
TAGGACC	1000	0.0	13.587729	4
CGACTAA	65	5.48424E-5	13.14621	17
GGTATCA	1160	0.0	12.870406	1
CCAACGA	145	7.2759576E-12	12.440763	19
CCAACGT	125	1.4260877E-9	12.152662	19
ACCGACT	65	7.996724E-4	11.697347	8
AGGACCT	1945	0.0	11.57896	5
GTAGGAC	3310	0.0	11.367581	3
TGTAGGA	3440	0.0	11.324689	2
CGGTTTC	210	0.0	11.308935	13
GGGCGAA	60	0.0058782077	11.083012	11
CTGTAGG	3380	0.0	10.916052	1
GACGTGG	1780	0.0	10.83894	7
GTCCTAC	3195	0.0	10.77428	1
GATATAC	735	0.0	10.738442	1
GGACCTG	1965	0.0	10.736957	6
GGACGTG	3345	0.0	10.625913	6
AGGACGT	3405	0.0	10.57701	5