SRR1512259_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512259_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	927545
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6542	0.7053027076853414	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4770	0.5142607636287189	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4278	0.46121751505317804	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2148	0.2315790608541904	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2055	0.22155259313564302	No Hit
GTCCTACAGTGGACATTTCTAAATT	2002	0.21583858465087946	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1940	0.20915427283851457	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1721	0.18554355853354826	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1648	0.1776733204318928	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1308	0.14101741694473044	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1028	0.11083020230824381	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1000	0.0	15.219579	1
AGTTCGA	40	0.005282945	14.247572	10
TAGAACG	65	5.4290107E-5	13.158704	4
GCTCTAT	60	4.045083E-4	12.682982	1
TAGTTCC	60	4.0765357E-4	12.671346	4
CTAATTG	55	0.0030583676	12.095375	3
ATAGGAC	130	2.59206E-9	11.696626	3
ATACTGT	125	1.814442E-8	11.405441	6
TTACCCT	85	5.29729E-5	11.180598	4
GATATAG	60	0.0058166157	11.0976095	1
AGTCGTC	140	8.270945E-9	10.861739	8
ACGGTGG	105	3.4431778E-6	10.861738	8
CTAAAGC	70	0.0014858332	10.861153	3
ATAGCAC	105	3.445406E-6	10.861152	3
CGCGCCT	70	0.0014925379	10.855293	12
TATACTG	115	8.7583066E-7	10.743096	5
GGCGAGG	505	0.0	10.716898	19
GTATCAA	2305	0.0	10.564566	1
AAGTCGT	135	5.637594E-8	10.560024	7
TAGAGTG	100	2.3857638E-5	10.453859	5