SRR1512254_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512254_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2245604
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	6357	0.28308642129244516	No Hit
GTCCTACAGTGGACATTTCTAAATT	5681	0.2529831617685041	No Hit
CTGTAGGACGTGGAATATGGCAAGA	5197	0.2314299404525464	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	5076	0.22604163512355696	No Hit
CTTTAGGACGTGAAATATGGCGAGG	4353	0.19384539749662005	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3739	0.16650308781067366	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3705	0.16498901854467662	No Hit
GTCCTACAGTGTGCATTTCTCATTT	3289	0.14646393576071293	No Hit
CTGAAGGACCTGGAATATGGCGAGA	2415	0.10754344933478921	No Hit
CTGTAGGACCTGGAATATGGCGAGA	2303	0.10255592704679899	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1250	0.0	13.227131	1
TATTGCG	120	7.3123374E-10	12.677609	16
TCCAACG	195	0.0	12.669098	18
TAGGACC	1170	0.0	12.589014	4
ATTGCGA	115	5.2586984E-9	12.4022875	17
TTGCGAG	105	2.7149508E-7	11.764162	18
GATATAC	455	0.0	11.486235	1
TATGTCG	110	4.916128E-7	11.236972	16
AGGACCT	2140	0.0	11.14566	5
TCGTATG	60	0.005863746	11.086701	2
GGACGTA	95	1.3565839E-5	11.003097	6
TGTAGGA	3535	0.0	10.994855	2
GGCGAGG	1255	0.0	10.906152	19
TAGTACC	150	2.1245796E-9	10.769698	4
AGGGACG	80	3.762269E-4	10.690509	5
GTCTTAG	250	0.0	10.64252	1
ATAGGAC	280	0.0	10.521053	3
GTAGGAC	3435	0.0	10.457325	3
CCAACGA	155	3.6325218E-9	10.424855	19
GTGTAGG	520	0.0	10.415927	1