SRR1512063_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512063_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	499437
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2461	0.49275484195203795	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1508	0.3019399844224597	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1497	0.29973750442998814	No Hit
GTCCTACAGTGGACATTTCTAAATT	993	0.19882387568402018	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	974	0.1950195920606603	No Hit
CTGTAGGACGTGGAATATGGCAAGA	964	0.19301733752204983	No Hit
CTTTAGGACGTGAAATATGGCGAGG	793	0.1587787849118107	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	665	0.1331499268175966	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	642	0.12854474137879252	No Hit
GTCCTACAGTGTGCATTTCTCATTT	615	0.12313865412454425	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	540	0.10812174508496566	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	525	0.10511836327704996	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTCGC	25	0.0061677666	18.923908	19
CTAGGAC	50	0.0015430176	13.246736	3
GGTATCA	435	0.0	13.114905	1
TAGGACT	65	5.6466582E-5	13.101167	4
TAGGACC	160	0.0	13.010187	4
GGACTGC	75	1.5358988E-5	12.615939	6
AAAATAG	55	0.0031568848	12.042488	5
TAAGACT	55	0.0031568848	12.042488	4
CCACCTT	135	3.929017E-10	11.915053	13
TTATACA	130	2.763045E-9	11.645482	4
TTAAGCT	65	8.280781E-4	11.645482	4
GATATAC	95	9.20891E-6	11.389259	1
ACTGTTC	100	2.0157458E-6	11.354345	8
AGGACCT	335	0.0	11.297856	5
TCCTAGA	70	0.0011129875	11.241346	2
AGGACTG	135	4.993126E-9	11.214168	5
TTTATAC	85	5.5272016E-5	11.131711	3
AGCTTTG	60	0.006044031	11.038946	7
ACCAGTG	60	0.006044031	11.038946	7
ATAACTC	60	0.006044031	11.038946	5