SRR1512063_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512063_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	499437
Sequences flagged as poor quality	0
Sequence length	25
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3979	0.7966970809131082	No Hit
GGTATCAACGCAGAGTACTTTTTTT	3188	0.6383187469090196	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3015	0.6036797433910583	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1422	0.2847205953904096	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1003	0.20082613022263068	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	949	0.19001395571413413	No Hit
CTGTAGGACGTGGAATATGGCAAGA	787	0.15757743218864442	No Hit
CTTTAGGACGTGAAATATGGCGAGG	656	0.1313478977328472	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTT	637	0.12754361410948728	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	634	0.12694293774790413	No Hit
GTCCTACAGTGGACATTTCTAAATT	598	0.11973482140890644	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	532	0.1065199414540773	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	735	0.0	14.914103	1
TTTATAC	55	1.9500198E-4	13.823137	3
AAAGGCG	55	1.9500198E-4	13.823137	5
TAGGACC	160	0.0	13.661147	4
GGCGTGC	50	0.0015009333	13.2954445	8
ACTGTGC	95	7.3803676E-8	12.995547	8
ACACCTC	55	0.0030713049	12.086768	6
GTGGTAT	175	1.8189894E-12	11.438469	1
CAGCACC	60	0.0058505605	11.087307	4
GATATAC	95	1.3052788E-5	11.037119	1
TATAGTG	95	1.3495914E-5	11.003943	5
TTAGGGT	70	0.0014838867	10.861036	4
GCTGTGC	70	0.0014925938	10.853424	8
TGTAGGA	590	0.0	10.792004	2
AATGTCC	180	3.45608E-11	10.551941	8
TGTCCAC	180	3.45608E-11	10.551941	10
TAGAAAT	200	1.8189894E-12	10.453747	4
ACCTTTT	195	1.4551915E-11	10.227264	15
TGGTATC	160	6.0790626E-9	10.09737	2
TTCCACC	170	1.551598E-9	10.055379	11