SRR1512060_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1512060_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	732681
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	5671	0.7740066959563575	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4422	0.6035368734824569	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4185	0.5711899175766807	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1985	0.27092281634162757	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1468	0.20036004755139003	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1381	0.18848584854800385	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1030	0.14057959739641127	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	925	0.12624866756473827	No Hit
CTTTAGGACGTGAAATATGGCGAGG	843	0.11505689379143175	No Hit
GTCCTACAGTGGACATTTCTAAATT	795	0.10850561158266694	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	761	0.10386512001812523	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1155	0.0	13.623414	1
CGAAATC	85	2.7038732E-7	13.407091	13
AAGTCGT	100	1.0088115E-8	13.295366	7
TAGGACC	180	0.0	13.197953	4
AGTCGTC	105	1.9965228E-8	12.662253	8
CAAGTCG	110	3.819514E-8	12.086697	6
ATAGCCC	80	2.8537355E-5	11.878159	3
AATGTCC	200	0.0	11.870863	8
ACGAAAT	105	2.7243914E-7	11.757807	12
ATAGACT	130	2.59206E-9	11.695418	4
CTACACT	75	2.0658517E-4	11.403032	4
GACGAAA	100	1.9328945E-6	11.3960285	11
ACACTGT	235	0.0	11.315205	6
ATACCCA	85	5.299347E-5	11.179443	4
ATAAGGT	60	0.005859022	11.086281	4
CCACCTT	240	0.0	11.079473	13
ATGTCCA	250	0.0	11.016161	9
TGCTAGA	70	0.0014864696	10.86003	2
AAATGTC	210	0.0	10.85336	7
TGACGAA	115	8.8300476E-7	10.735389	10