SRR1511970_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1511970_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	602487
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	2317	0.3845726131850148	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1783	0.2959399953857926	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1753	0.29096063483527446	No Hit
CTGTAGGACGTGGAATATGGCAAGA	943	0.1565178999712857	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	805	0.13361284143890242	No Hit
CTTTAGGACGTGAAATATGGCGAGG	788	0.13079120379360884	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	771	0.12796956614831523	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	740	0.12282422691277986	No Hit
GTCCTACAGTGGACATTTCTAAATT	731	0.12133041874762443	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	609	0.10108101917551748	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTACAC	40	0.005261915	14.254983	3
AACCTCA	40	0.005267718	14.252616	6
TAGGACT	75	9.606465E-7	13.938206	4
GGTATCA	605	0.0	12.921317	1
CACCTTT	165	0.0	12.661631	14
GGCGAGG	265	0.0	12.543223	19
CCACCTT	170	0.0	12.289231	13
TAGGCTG	70	1.0852131E-4	12.218557	5
TCATACA	70	1.0852131E-4	12.218557	2
ATAGAAC	105	2.6967427E-7	11.766018	3
TTTATCC	105	2.6967427E-7	11.766018	3
ATATACT	85	5.291199E-5	11.18038	4
GACGTGG	260	0.0	10.957181	7
GTGTAGG	70	0.001446108	10.895328	1
GTAGACC	70	0.001484767	10.86094	3
CCTGGAC	70	0.001484767	10.86094	3
GACAGCC	70	0.0014940538	10.852827	7
TAGGACC	255	0.0	10.8077	4
ACCTTTT	195	1.8189894E-12	10.713688	15
AATGTCC	170	1.382432E-10	10.613427	8