Basic Statistics
Measure | Value |
---|---|
Filename | SRR1511948_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1045611 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 3099 | 0.29638173278590224 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 1822 | 0.1742521836514727 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 1806 | 0.1727219778674861 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 590 | 0.0 | 13.589072 | 1 |
TACACCG | 50 | 0.0014957915 | 13.303751 | 5 |
GTACTGA | 120 | 9.32414E-9 | 11.930882 | 1 |
TAGGACT | 115 | 7.0349415E-8 | 11.56848 | 4 |
GTCTAGG | 100 | 1.8215287E-6 | 11.453646 | 1 |
GTATCAA | 1300 | 0.0 | 11.013121 | 1 |
CTAGGAC | 105 | 3.450381E-6 | 10.860207 | 3 |
ATTAGAC | 70 | 0.0014871908 | 10.860206 | 3 |
GTACTAA | 75 | 0.0025452166 | 10.181019 | 1 |
TATGACC | 85 | 6.5720297E-4 | 10.061661 | 4 |
GAACTTA | 85 | 6.60391E-4 | 10.056367 | 6 |
GTATAAC | 115 | 9.694577E-6 | 9.959692 | 1 |
GTGGTAT | 155 | 3.7694917E-8 | 9.852599 | 1 |
GGACTGT | 165 | 1.0233634E-8 | 9.785488 | 6 |
ATACTGT | 235 | 0.0 | 9.699759 | 6 |
GTCCTAA | 110 | 6.486908E-5 | 9.544705 | 1 |
GTGCTAA | 90 | 0.0010660798 | 9.544705 | 1 |
GTGTAAG | 160 | 6.1563696E-8 | 9.544705 | 1 |
GCATTAT | 100 | 2.6260654E-4 | 9.544704 | 1 |
CTAAACT | 130 | 4.2166703E-6 | 9.502681 | 4 |