SRR1511876_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1511876_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1122333
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTACAGTGGACATTTCTAAATT	3612	0.32182961741301375	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3576	0.3186220132527512	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3432	0.3057915966117008	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3018	0.26890414876868096	No Hit
GTATCAACGCAGAGTACTTTTTTTT	2825	0.2517078264650509	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1757	0.15654890304392724	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1739	0.15494510096379596	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1518	0.13525397542440615	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1442	0.12848236664162951	No Hit
ATTTAGAAATGTCCACTGTAGGACG	1345	0.1198396554320331	No Hit
TTTCTAAATTTTCCACCTTTTTCAG	1323	0.1178794528896504	No Hit
GTCCTTCAGTGTGCATTTCTCATTT	1248	0.11119694422243664	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1171	0.10433623532409722	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGACGT	40	0.0052821655	14.248262	5
TAGGACC	500	0.0	13.868309	4
CGGTAGG	65	5.3970754E-5	13.167495	1
GGTATCA	615	0.0	12.834441	1
CCAACGA	60	4.094662E-4	12.665122	19
GGCGAGG	820	0.0	12.163151	19
TATTGCG	55	0.0030703347	12.089436	16
ATTGCGA	55	0.0030703347	12.089436	17
GGACCTA	80	2.8682754E-5	11.873552	6
TAGGGAC	65	8.0285815E-4	11.690883	5
TTAACCT	90	7.465407E-6	11.609696	4
CCTACAC	135	4.7293724E-9	11.257887	3
ATAGGAC	200	0.0	10.923667	3
GGCGTGC	70	0.0014923598	10.85582	8
GGACCTG	1120	0.0	10.85582	6
AGGACCT	1200	0.0	10.765353	5
GCGCCAC	80	3.7731646E-4	10.686196	13
GTAGGAC	1965	0.0	10.586495	3
GCCTACA	135	5.592301E-8	10.566508	2
AGGACGT	1965	0.0	10.538155	5