SRR1511864_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1511864_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1886530
Sequences flagged as poor quality	0
Sequence length	25
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7785	0.4126624013400264	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5056	0.26800527953438325	No Hit
GGTATCAACGCAGAGTACTTTTTTT	4897	0.2595771071756081	No Hit
GTCCTACAGTGGACATTTCTAAATT	4494	0.23821513572537942	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3960	0.20990919836949318	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3849	0.20402537993034833	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3621	0.19193969881210476	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2522	0.13368459552723785	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2271	0.12037974482250481	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2036	0.10792301209098186	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1924	0.10198618627851135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTAGG	75	1.6916601E-9	17.30888	1
CCAACGA	100	4.3655746E-11	15.114331	19
GCGAACC	45	7.0635875E-4	14.693321	11
CGTGTAG	40	0.005484232	14.16856	10
GGTATCA	1285	0.0	13.599463	1
AGCGTAC	60	2.6851217E-4	13.314523	1
TAGGACC	985	0.0	13.13803	4
TCCAACG	180	0.0	13.12008	18
CCGGTTT	100	1.554854E-7	12.279418	12
CGCCCTA	55	0.0032015224	12.022764	16
TAAGACG	55	0.0032027932	12.022128	4
GCCGGTT	105	2.9308467E-7	11.694685	11
GTCTAAG	175	7.2759576E-12	11.412448	1
TGCCGGT	110	5.351776E-7	11.163109	10
GGACCTG	1625	0.0	11.160466	6
TACACCG	85	5.642473E-5	11.11289	5
AGGACCT	1730	0.0	11.083984	5
GGCGAGG	1075	0.0	10.8963785	19
GTCCCGG	65	0.00735329	10.754037	1
GTAGGAC	2840	0.0	10.709852	3