Basic Statistics
Measure | Value |
---|---|
Filename | SRR1511782_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1810752 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCCTACAGTGGACATTTCTAAATT | 7865 | 0.4343499275439155 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 7725 | 0.4266183331566112 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 7308 | 0.4035892270172834 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 6925 | 0.38243779380058673 | No Hit |
GTATCAACGCAGAGTACTTTTTTTT | 6473 | 0.3574757890644329 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 4395 | 0.24271683808715938 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 4336 | 0.23945852330965253 | No Hit |
GTCCTACAGTGTGCATTTCTCATTT | 4196 | 0.23172692892234828 | No Hit |
CTGAAGGACCTGGAATATGGCGAGA | 3957 | 0.21852799278973598 | No Hit |
CTGTAGGACCTGGAATATGGCGAGA | 3371 | 0.18616574771144806 | No Hit |
ATTTAGAAATGTCCACTGTAGGACG | 3166 | 0.17484448450146678 | No Hit |
TTTCTAAATTTTCCACCTTTTTCAG | 3164 | 0.17473403315307673 | No Hit |
GAATATGGCAAGAAAACTGAAAATC | 2848 | 0.1572827201074471 | No Hit |
GTCCTTCAGTGTGCATTTCTCATTT | 2673 | 0.1476182271233167 | No Hit |
GGAATATGGCGAGAAAACTGAAAAT | 2620 | 0.14469126639098012 | No Hit |
ACGCAGAGTACTTTTTTTTTTTTTT | 2189 | 0.12088900081292193 | No Hit |
ACAGTGGACATTTCTAAATTTTCCA | 2108 | 0.11641572120312445 | No Hit |
ATTCCAGGTCCTTCAGTGTGCATTT | 1998 | 0.11034089704167109 | No Hit |
GCCATATTCCACGTCCTACAGTGGA | 1984 | 0.10956773760294065 | No Hit |
TTCCAGGTCCTTCAGTGTGCATTTC | 1900 | 0.10492878097055809 | No Hit |
ACCTGGAATATGGCGAGAAAACTGA | 1830 | 0.10106298377690595 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 1080 | 0.0 | 14.657852 | 1 |
TCCGTAG | 40 | 0.005289893 | 14.245796 | 8 |
GGACCGA | 40 | 0.005289893 | 14.245796 | 6 |
TAGGACC | 1270 | 0.0 | 13.465428 | 4 |
CATTTCG | 65 | 8.0444326E-4 | 11.688858 | 14 |
AAATGTC | 1035 | 0.0 | 11.561806 | 7 |
GGCGAGT | 100 | 1.936187E-6 | 11.396951 | 19 |
ACGTTTC | 75 | 2.0798668E-4 | 11.396637 | 13 |
AGGACCT | 2640 | 0.0 | 11.37194 | 5 |
TAGAAAT | 1095 | 0.0 | 11.366024 | 4 |
CACCTTT | 990 | 0.0 | 11.223961 | 14 |
GTCGAGG | 145 | 1.2223609E-9 | 11.134953 | 19 |
ACGGCGA | 60 | 0.0058892127 | 11.080064 | 17 |
GGACCTG | 2525 | 0.0 | 11.058123 | 6 |
CCACCTT | 980 | 0.0 | 11.047761 | 13 |
AGGACGG | 155 | 3.1286618E-10 | 11.032964 | 5 |
GAAATGT | 1095 | 0.0 | 11.015015 | 6 |
AATGTCC | 1080 | 0.0 | 10.992126 | 8 |
ACCTTTT | 965 | 0.0 | 10.924237 | 15 |
GGCGAGG | 2045 | 0.0 | 10.913951 | 19 |