SRR1511774_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1511774_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	804743
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3382	0.4202583930521918	No Hit
GTCCTACAGTGGACATTTCTAAATT	2786	0.3461974816804868	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2581	0.320723510487199	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2187	0.271763780486441	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1899	0.2359759575417245	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1880	0.23361495533356613	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1531	0.19024707266792007	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1449	0.18005748419060497	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1101	0.13681386479907248	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1066	0.13246465020509654	No Hit
CTGAAGGACCTGGAATATGGCGAGA	810	0.10065325203201518	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTAGG	25	0.0045944704	19.914614	1
TAAGACG	25	0.00622098	18.897476	4
GGTCTAT	40	0.0038607013	14.935962	1
AAGGCGT	65	3.5616558E-6	14.536522	6
AGCGTGT	40	0.0054689664	14.173108	8
GTGCGCC	40	0.0054689664	14.173108	11
GGCGTGC	55	2.0502537E-4	13.743621	8
CTACCCT	70	7.668863E-6	13.4981985	4
GCCCTAA	45	0.00842902	13.276409	1
CGGTAGG	45	0.00842902	13.276409	1
GGCCTAC	45	0.00842902	13.276409	1
AGCACCG	50	0.0015607949	13.228234	5
TCCAACG	115	4.0927262E-10	13.147705	18
GACATTG	65	5.729648E-5	13.08287	7
TAGGACC	490	0.0	12.53404	4
TAGGACT	130	2.1645974E-10	12.356044	4
GGTATCA	560	0.0	12.268826	1
ATAGGAC	140	5.820766E-11	12.148378	3
AGGCGTG	70	1.1460739E-4	12.148378	7
CGCCACC	55	0.003193006	12.025668	14