Basic Statistics
Measure | Value |
---|---|
Filename | SRR1511728_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2335067 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 5234 | 0.22414774394053788 | No Hit |
GTCCTACAGTGGACATTTCTAAATT | 4162 | 0.17823899699666007 | No Hit |
CTGTAGGACGTGGAATATGGCAAGA | 3884 | 0.16633355702427383 | No Hit |
GTCCTAAAGTGTGTATTTCTCATTT | 3783 | 0.16200819933646443 | No Hit |
CTTTAGGACGTGAAATATGGCGAGG | 3526 | 0.15100209116055344 | No Hit |
GGTATCAACGCAGAGTACTTTTTTT | 3189 | 0.13656995709330824 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 3051 | 0.1306600624307568 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGGACC | 595 | 0.0 | 13.191644 | 4 |
TGTCGAG | 110 | 2.9431249E-9 | 12.895446 | 18 |
TATGTCG | 120 | 7.9671736E-10 | 12.608881 | 16 |
TCCAACG | 310 | 0.0 | 12.202144 | 18 |
ATGTCGA | 125 | 1.5170372E-9 | 12.104526 | 17 |
GGTATCA | 1425 | 0.0 | 12.070197 | 1 |
CGACTAA | 120 | 1.07247615E-8 | 11.820826 | 17 |
CCAACGA | 195 | 0.0 | 11.6389675 | 19 |
AGTCGTC | 180 | 3.6379788E-12 | 11.032771 | 8 |
GCGACTA | 130 | 3.4960976E-8 | 10.911531 | 16 |
TAATACG | 70 | 0.0015498811 | 10.807611 | 4 |
AAGTCGT | 185 | 5.456968E-12 | 10.734588 | 7 |
GGCGAGG | 985 | 0.0 | 10.464731 | 19 |
GGACGTG | 2460 | 0.0 | 10.417704 | 6 |
GGACCTG | 1345 | 0.0 | 10.405843 | 6 |
AGGACGT | 2505 | 0.0 | 10.381563 | 5 |
GTCCTAA | 1200 | 0.0 | 10.379329 | 1 |
TGTAGGA | 2120 | 0.0 | 10.351353 | 2 |
GTCGAGG | 110 | 6.3873304E-6 | 10.316357 | 19 |
CGGTAGG | 115 | 6.397986E-6 | 10.314861 | 1 |