SRR1295361_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1295361_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10506728
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNN	56366	0.5364752946873661	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAA	38205	0.3636241463565061	No Hit
GTACATGGGAAGCAGTGGTATCAAC	29754	0.28318997122605627	No Hit
GTATCAACGCAGAGTACTTTTTTTT	29646	0.2821620584448365	No Hit
TATCAACGCAGAGTACTTTTTTTTT	21021	0.20007180161131038	No Hit
GGTATCAACGCAGAGTACTTTTTTT	19364	0.18430095458833615	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	16894	0.16079220857340173	No Hit
CCCATGTACTCTGCGTTGATACCAC	16285	0.15499592261263448	No Hit
GGTATCAACGCAGAGTACATGGGGG	14085	0.1340569585507496	No Hit
GAGTACATGGGAAGCAGTGGTATCA	12341	0.11745807067623716	No Hit
GCTTCCCATGTACTCTGCGTTGATA	10797	0.10276272498916884	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATAACGC	1390	14.359796	3
ACGATTT	890	14.300479	15
CACGATT	905	13.9588375	14
TATAACG	1335	13.95544	2
GTATAAC	1405	13.39488	1
TGCGCGT	360	13.191651	10
AGCGCGA	500	13.107664	12
ACGCACG	780	12.907832	11
CGCACGA	975	12.859246	12
CGCGGAA	510	12.85065	14
GGCTACG	915	12.67327	1
TAACGCA	1620	12.555745	4
CGCGTGG	395	12.263638	12
TGTCACG	815	12.237903	7
AAGCGCG	545	12.025264	11
CGCTCGA	395	12.023174	14
GCTACGC	680	12.021489	2
GTCACGC	850	11.845287	8
AACGAGC	490	11.832526	3
TACGCCC	770	11.726723	4