SRR1295010_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1295010_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	634200
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	3452	0.544307789340902	No Hit
CCCATGTACTCTGCGTTGATACCAC	3390	0.5345316934720908	No Hit
GAGTACATGGGAAGCAGTGGTATCA	1363	0.21491643014821823	No Hit
CATGTACTCTGCGTTGATACCACTG	1125	0.1773888363292337	No Hit
GCGTTGATACCACTGCTTCCCATGT	970	0.15294859665720592	No Hit
GCTTCCCATGTACTCTGCGTTGATA	856	0.13497319457584359	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	843	0.13292336802270577	No Hit
GTATCAACGCAGAGTACATGGGAAG	739	0.1165247555976033	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNN	710	0.1119520655944497	No Hit
ACTCTGCGTTGATACCACTGCTTCC	682	0.10753705455692211	No Hit
TATCAACGCAGAGTACATGGGAAGC	677	0.10674865972879219	No Hit
GGTATCAACGCAGAGTACATGGGAA	664	0.10469883317565437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTAGT	40	0.005234924	14.266194	1
GACAGGC	65	5.4491204E-5	13.152151	7
GTCTTAC	70	1.0774427E-4	12.228167	1
GTCTACT	55	0.0030390227	12.10465	1
CTAGTAC	55	0.0030498437	12.098908	3
ACTGTTC	95	1.0371568E-6	11.999401	8
GCCCAGA	80	2.8270115E-5	11.888495	1
TTAGGGT	65	7.9517125E-4	11.702818	4
TAATGCT	90	7.3668343E-6	11.62155	4
CTAGGAC	90	7.3863193E-6	11.618793	3
AGCACTG	85	5.2626732E-5	11.186518	5
TAGACCC	60	0.0058300053	11.093297	5
GTCTTGG	70	0.0014752381	10.869482	1
CTAGACA	80	3.732888E-4	10.697108	4
AAAGGTG	90	9.407599E-5	10.565044	5
GGTTTAA	110	5.94461E-6	10.375414	1
CATACTG	110	5.9614704E-6	10.372953	5
CTAGACT	75	0.0026242256	10.142443	4
GAGGTGT	75	0.0026466951	10.132027	6
AACCCGA	75	0.002651904	10.129626	11