SRR1294974_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1294974_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4439332
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGGAAGCAGTGGTATCAAC	15833	0.35665275766714455	No Hit
CCCATGTACTCTGCGTTGATACCAC	14162	0.31901195945696337	No Hit
GAGTACATGGGAAGCAGTGGTATCA	7004	0.15777148453866482	No Hit
GTATCAACGCAGAGTACTTTTTTTT	6694	0.15078845195628532	No Hit
ATTCCATTCCATTCCATTCCATTCC	5581	0.12571711239438726	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNN	5316	0.1197477458320306	No Hit
CATGTACTCTGCGTTGATACCACTG	5147	0.11594086677905593	No Hit
GGTATCAACGCAGAGTACTTTTTTT	5138	0.11573813357505139	No Hit
GCGTTGATACCACTGCTTCCCATGT	4720	0.10632230254461707	No Hit
GTATCAACGCAGAGTACATGGGAAG	4580	0.10316867492676826	No Hit
GCTTCCCATGTACTCTGCGTTGATA	4496	0.10127649835605897	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTCCA	65	5.463569E-5	13.152143	9
ACCGTCC	85	6.6059385E-4	10.057521	8
CCGCCCG	85	6.612112E-4	10.056499	17
CTAGGAC	395	0.0	9.865052	3
GTATTAG	755	0.0	9.699204	1
TAGGACT	550	0.0	9.331755	4
GTCTCGC	260	0.0	9.14448	1
CTAATAC	585	0.0	9.097975	3
GTACTAC	335	0.0	9.084427	1
AAGACCG	105	4.477124E-4	9.0513525	5
AGACGGT	105	4.505006E-4	9.045732	6
AGGAGCG	95	0.0018180078	9.003714	5
GTATTAC	520	0.0	8.96159	1
GTCCTAG	490	0.0	8.927998	1
TCTGTCG	385	0.0	8.881967	8
TCGAGTG	150	2.7131737E-6	8.864617	19
TCAGGAC	560	0.0	8.825268	3
CCTAGAC	540	0.0	8.800125	3
GTCTAAG	455	0.0	8.778701	1
CTTACAC	700	0.0	8.689495	3