SRR1294969_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1294969_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2398367
Sequences flagged as poor quality	0
Sequence length	25
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	10657	0.4443440057339014	No Hit
GTACATGGGAAGCAGTGGTATCAAC	7805	0.32542976116666045	No Hit
CCCATGTACTCTGCGTTGATACCAC	7632	0.3182165198236967	No Hit
GGTATCAACGCAGAGTACTTTTTTT	7224	0.3012049448645683	No Hit
TATCAACGCAGAGTACTTTTTTTTT	5997	0.2500451348771894	No Hit
GAGTACATGGGAAGCAGTGGTATCA	3599	0.15006043695564522	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	3556	0.1482675503790704	No Hit
CATGTACTCTGCGTTGATACCACTG	2622	0.10932438613439895	No Hit
GTATCAACGCAGAGTACATGGGAAG	2527	0.10536335765126854	No Hit
GCGTTGATACCACTGCTTCCCATGT	2511	0.10469623706463606	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATCGTA	35	0.0021718885	16.284338	7
TATGCCG	45	6.764281E-4	14.777761	5
ATAGACG	70	1.09096414E-4	12.214781	3
TTTGACG	60	0.0058754613	11.083783	3
TGTACCG	60	0.0058772853	11.083322	5
TAGACGT	70	0.0014919285	10.857131	4
TATTCCG	90	9.519208E-5	10.555544	5
ACACCGT	75	0.0026484933	10.133322	6
CAGGACC	245	0.0	10.081622	4
GCTAGAC	135	6.4424967E-7	9.852251	3
CTTACAC	380	0.0	9.750396	3
TAGACAG	425	0.0	9.611754	5
CTAGACA	280	0.0	9.4999895	4
CCTTGCG	80	0.0045201094	9.499197	9
GTATTAA	465	0.0	9.404898	1
CTACACT	355	0.0	9.098581	4
TTAGACA	305	0.0	9.032777	4
GACTAGT	95	0.0018118069	9.00675	1
CTTTGCG	85	0.0074423747	8.940421	9
GTATAGA	375	0.0	8.873318	1