SRR1294728_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1294728_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3194450
Sequences flagged as poor quality	0
Sequence length	25
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	12782	0.4001314780322121	No Hit
GTACATGGGAAGCAGTGGTATCAAC	11522	0.36068806836857675	No Hit
CCCATGTACTCTGCGTTGATACCAC	11001	0.3443785315155974	No Hit
GGTATCAACGCAGAGTACTTTTTTT	9809	0.30706381380206293	No Hit
TATCAACGCAGAGTACTTTTTTTTT	8537	0.26724475261782155	No Hit
GAGTACATGGGAAGCAGTGGTATCA	5814	0.18200316173363176	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	5325	0.16669536226893517	No Hit
CATGTACTCTGCGTTGATACCACTG	4362	0.13654932774029957	No Hit
ATTCCATTCCATTCCATTCCATTCC	4118	0.1289110801546432	No Hit
ACGCAGAGTACATGGGAAGCAGTGG	3912	0.12246239571757267	No Hit
GCGTTGATACCACTGCTTCCCATGT	3756	0.117578925949694	No Hit
GTATCAACGCAGAGTACATGGGAAG	3528	0.11044154705817902	No Hit
GAATGGAATGGAATGGAATGGAATG	3421	0.1070919876661084	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCGTC	40	0.005301949	14.241384	7
CCGGTCG	40	0.00530305	14.240937	9
AGCGTAT	55	1.9720438E-4	13.809178	10
CCGCGTG	60	0.0059058587	11.076284	9
CGTGCAA	75	0.002663241	10.12673	10
TTGGACC	205	4.0017767E-11	9.747794	4
TAGACTG	415	0.0	9.630352	5
TCTATAC	450	0.0	9.515705	3
CTACGCA	90	0.0010974841	9.515704	4
CGGACTG	90	0.0010974841	9.515704	5
GCGCAGA	80	0.0045420057	9.49381	11
TCTAGAC	260	0.0	9.149715	3
CTAATAC	460	0.0	9.101978	3
ATCGCGC	105	4.5220088E-4	9.042148	8
TATTCCG	160	6.5875065E-7	8.920973	5
TCAGTAC	320	0.0	8.920973	3
AGGACCG	120	1.7333939E-4	8.722729	5
GTCTAGC	230	3.8926373E-10	8.6915245	1
CTAGACT	340	0.0	8.676083	4
TCAGAAC	385	0.0	8.6506405	3