SRR1248490_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1248490_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16040768
Sequences flagged as poor quality	0
Sequence length	100
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	29794	0.1857392364255876	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	24044	0.14989307245139386	No Hit
TTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23408	0.14592817501007432	No Hit
TTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22901	0.1427674784648715	No Hit
TTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21434	0.13362203106484677	No Hit
CCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	21313	0.13286770309252027	No Hit
TTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19627	0.12235698440373928	No Hit
CATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	19177	0.11955163244054151	No Hit
TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18922	0.11796193299472943	No Hit
GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18612	0.11602935719785985	No Hit
TTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18472	0.11515658103153166	No Hit
ATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18228	0.1136354568559311	No Hit
ACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17434	0.10868556916975546	No Hit
TATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17293	0.1078065588879535	No Hit
CTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17139	0.10684650510499247	No Hit
CTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16620	0.10361099917410438	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCCCTA	6970	54.416286	6
GCCCTAC	17160	49.600872	7
TGCTCTA	7265	47.225372	6
CCCGGAA	3265	45.919342	6
CCCCTAC	45140	44.42723	7
TTGCTCT	2635	43.699486	5
GCCTTTT	2175	42.81448	1
TTGCCCT	3200	42.152447	5
CCCCCTA	25105	41.803886	6
GCCCCTA	5155	41.756584	6
CCCCGGA	1155	41.505825	5
GTCCCTA	2185	41.298847	6
CCGGAAG	10835	40.774353	7
CTGCCCT	3835	40.565186	5
TGCTCGG	570	40.40286	5
ATTGCTC	705	39.999355	4
CTCCGGA	1260	39.912052	5
CGCCCTA	7180	39.14397	6
CTGCGTC	1705	39.142822	6
TTGCGTC	1840	38.82522	6