SRR2048274_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2048274_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19177401
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT	147603	0.7696715524694926	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTG	28504	0.14863327934791581	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTA	27208	0.14187532502449107	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTC	26825	0.13987818265884933	No Hit
ATATACATATATATGTATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTT	25973	0.135435453427709	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTAA	20581	0.10731902618086778	No Hit
ATATACATATATATGTGTCGACGGCGCGCCGGATCCATATTTTTTTTTTT	20218	0.10542617323379742	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTCC	19636	0.10239135115337059	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTGG	19388	0.1010981623630856	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGACG	56770	80.60798	1
TATCTCG	75405	78.11878	2
ATATCTC	80960	73.380325	1
TCGACGG	62990	72.347084	2
ATCTCGA	81980	71.69696	3
TCTCGAG	76430	70.369675	4
CGACGGC	66800	68.25627	3
GACGGCG	67860	66.74278	4
CTCGAGG	80105	66.548775	5
ACGGCGC	68050	66.26383	5
TCGAGGG	80705	65.851006	6
CGGCGCG	69310	64.99413	6
AGGGCGC	84510	62.9868	9
CTCGACG	7480	61.624638	5
CGAGGGC	88970	59.65961	7
GAGGGCG	90530	58.63589	8
TCTCGAC	8250	57.31243	4
ATATACA	185495	37.657867	1
ACATATA	232665	32.61193	5
TATACAT	257420	32.581905	2