##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2048257_2.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1702900 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.407779082741207 31.0 31.0 34.0 28.0 34.0 2 31.596565858241824 31.0 31.0 34.0 28.0 34.0 3 31.551223794703155 31.0 31.0 34.0 28.0 34.0 4 35.301537377414995 37.0 35.0 37.0 32.0 37.0 5 35.24426918785601 37.0 35.0 37.0 32.0 37.0 6 35.25264020200834 37.0 35.0 37.0 32.0 37.0 7 35.1982265547008 37.0 35.0 37.0 32.0 37.0 8 35.23371190322391 37.0 35.0 37.0 32.0 37.0 9 36.815041987198306 39.0 37.0 39.0 32.0 39.0 10-11 36.79013154031358 39.0 37.0 39.0 32.0 39.0 12-13 36.802315168242416 39.0 37.0 39.0 32.0 39.0 14-15 37.95829203124082 40.0 38.0 41.0 32.0 41.0 16-17 37.94873597979917 40.0 38.0 41.0 32.0 41.0 18-19 37.9854556932292 40.0 38.0 41.0 32.0 41.0 20-21 37.91048916554114 40.0 38.0 41.0 32.0 41.0 22-23 38.01607933525163 40.0 38.0 41.0 32.0 41.0 24-25 38.0074076575254 40.0 38.0 41.0 32.0 41.0 26-27 38.05038346350344 40.0 38.0 41.0 32.0 41.0 28-29 37.824319396323915 40.0 37.5 41.0 32.0 41.0 30-31 37.64385518820835 40.0 36.5 41.0 32.0 41.0 32-33 37.54200951318339 40.0 36.0 41.0 32.0 41.0 34-35 37.29880057548887 40.0 35.5 41.0 31.5 41.0 36-37 37.1937192436432 40.0 35.0 41.0 31.0 41.0 38-39 37.04442568559516 39.5 35.0 41.0 30.5 41.0 40-41 36.59479182570908 39.5 35.0 41.0 29.5 41.0 42-43 36.43076986317458 39.0 35.0 40.5 29.0 41.0 44-45 36.24283281461037 39.0 35.0 40.0 28.5 41.0 46-47 36.15654090081625 39.0 35.0 40.0 28.0 41.0 48-49 36.02731047037406 38.5 34.0 40.0 28.0 41.0 50-51 35.984546655704975 38.0 34.0 40.0 28.0 41.0 52-53 35.83215191731752 38.0 34.0 40.0 28.0 41.0 54-55 35.964274179341125 38.0 34.0 40.0 28.0 41.0 56-57 35.858710435140054 38.0 34.0 40.0 28.0 41.0 58-59 35.62087174819426 38.0 34.0 40.0 28.0 41.0 60-61 35.361752598508424 37.5 34.0 40.0 28.0 41.0 62-63 35.0350287744436 37.0 34.0 40.0 27.5 41.0 64-65 34.67213841094603 36.5 33.0 40.0 27.0 41.0 66-67 34.33627664572201 36.0 33.0 39.0 26.0 41.0 68-69 33.9982450525574 35.5 33.0 39.0 26.0 41.0 70-71 33.61994949791532 35.0 32.5 38.5 26.0 40.0 72-73 33.42601591402901 35.0 32.5 37.5 26.0 40.0 74-75 33.3676272828704 35.0 33.0 37.0 26.5 39.0 76-77 33.04243114686711 35.0 33.0 37.0 26.0 39.0 78-79 32.738557754418935 35.0 33.0 36.0 26.0 39.0 80-81 32.48447941746433 35.0 33.0 36.0 26.0 37.0 82-83 32.22872071172705 35.0 32.0 35.5 26.0 37.0 84-85 31.997616712666627 35.0 32.0 35.0 25.5 36.5 86-87 31.79817311644841 35.0 32.0 35.0 25.0 36.0 88-89 31.616879147336896 35.0 32.0 35.0 25.0 36.0 90-91 31.430673263256796 35.0 32.0 35.0 25.0 36.0 92-93 31.275933114099477 35.0 32.0 35.0 24.5 35.5 94-95 31.144881966057902 35.0 32.0 35.0 24.0 35.0 96-97 30.99039931880909 35.0 32.0 35.0 24.0 35.0 98-99 30.816619296494217 35.0 32.0 35.0 23.0 35.0 100-101 30.208511362969055 34.5 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 27.0 11 266.0 12 1072.0 13 2273.0 14 3189.0 15 3836.0 16 4275.0 17 5187.0 18 7012.0 19 10773.0 20 10709.0 21 10823.0 22 12378.0 23 14371.0 24 16032.0 25 18115.0 26 21242.0 27 25027.0 28 29879.0 29 34728.0 30 39926.0 31 47519.0 32 57473.0 33 71916.0 34 94586.0 35 133197.0 36 219045.0 37 368517.0 38 365876.0 39 73541.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.131407789521923 38.537334829585845 13.821260494820892 19.509996886071338 2 23.174602055758893 27.79897288416546 32.159780361916475 16.86664469815917 3 21.83285733921835 27.803362543042127 23.503673045496893 26.860107072242634 4 26.02983229905611 26.22873779016352 25.259058835139893 22.48237107564048 5 22.453345928331874 30.36910277671547 24.58867989259004 22.58887140236262 6 21.969716549345414 25.37757394058438 26.085789404434085 26.56692010563612 7 26.710406687042916 25.976896999711034 24.130994528484067 23.181701784761984 8 26.902005697001734 25.084662144304463 25.598860599653484 22.41447155904032 9 21.35374977023287 25.963304206984805 25.936466231425566 26.746479791356766 10-11 25.1042431613227 25.65613512955632 24.972671129525782 24.266950579595207 12-13 24.687986855310346 25.69650588733408 24.85951847826023 24.75598877909534 14-15 24.55633315862956 25.567207367507738 25.135879897761587 24.74057957610111 16-17 24.660432203887485 27.74625638616478 24.990428093252685 22.60288331669505 18-19 22.27163795386573 25.467805195727987 27.342578743660077 24.9179781067462 20-21 22.258706374161783 28.171781821769663 25.341131062219347 24.228380741849207 22-23 21.78637726982117 27.864128051819364 28.02647472481387 22.323019953545593 24-25 21.72528793760378 25.65853117021108 30.16844254375377 22.447738348431372 26-27 21.653414763051266 25.45751365317987 31.067502495742556 21.82156908802631 28-29 21.714681564088316 25.49874725871075 31.084370040865327 21.702201136335606 30-31 21.73327852486934 25.419108579482057 31.006400845616298 21.841212050032297 32-33 21.73857504680101 25.359527218000956 31.125000917666924 21.776896817531107 34-35 21.774307207159595 25.53127330596809 31.03065964331225 21.663759843560065 36-37 21.768650753917136 25.44323151221234 30.92145232003754 21.866665413832987 38-39 21.89782801119033 25.4471111121553 30.659496599494517 21.995564277159847 40-41 22.60118033942099 26.253919783898056 28.42947325151213 22.71542662516883 42-43 22.658168230050922 26.433575304068597 28.382074942610007 22.526181523270473 44-45 22.784454795281576 26.6963312797724 28.02275291877066 22.496461006175362 46-47 22.661929649421573 27.15332667801985 27.785924011979564 22.39881966057901 48-49 22.676845381408185 27.244259792119323 27.526278701039402 22.552616125433083 50-51 22.60385225204064 27.183216865347347 27.716454283868696 22.49647659874332 52-53 22.617300147609775 27.289661942194638 27.594395233029356 22.498642677166234 54-55 22.68917235680782 27.03169898502407 27.68142335061273 22.597705307555383 56-57 22.619942451112806 26.85442480474485 28.030271889130308 22.495360855012038 58-59 22.677050913148157 27.004727230019377 27.87488989371073 22.443331963121736 60-61 22.6946972811087 26.942333666099007 27.797844852897995 22.5651241998943 62-63 22.711961947266428 26.914528157848377 27.85471842151624 22.51879147336896 64-65 22.866855314462097 27.14032395076287 27.53311344325488 22.459707291520157 66-67 22.920785887059125 27.080770290053795 27.31190663407112 22.68653718881596 68-69 22.882553291444008 27.132773504022552 27.311644841153328 22.673028363380116 70-71 22.944124728404486 27.400405191144518 27.032033589758647 22.62343649069235 72-73 22.903562617852025 27.297215242204807 26.961195670620956 22.838026469322212 74-75 22.911544268384993 27.242311190870616 27.144389825103925 22.701754715640465 76-77 23.001382963417534 27.39756234346234 26.929498227986365 22.67155646513376 78-79 23.027981678313466 27.29511421692407 26.912472840448647 22.764431264313817 80-81 23.04636208820248 27.139585413118798 27.011627224147045 22.802425274531682 82-83 23.110928416231136 27.367578836103117 26.855599271830403 22.66589347583534 84-85 23.17205942803453 27.21545598684597 26.840624816489516 22.771859768629984 86-87 23.199747489576605 27.177814316753775 26.94597451406424 22.67646367960538 88-89 23.281937659856027 27.24702778995472 26.757832743506004 22.713201806683248 90-91 23.39538434435375 27.243202771742318 26.580216101943744 22.781196781960187 92-93 23.301250807446124 27.193258558928886 26.69490281284867 22.810587820776323 94-95 23.43496388513712 27.397997533619122 26.53432380057549 22.632714780668273 96-97 23.423454107698632 27.33862822244407 26.48452639614775 22.753391273709557 98-99 23.483704269187854 27.26293381877973 26.616125433084736 22.637236478947678 100-101 23.618533090610136 27.45026131892654 26.306858887779672 22.624346702683656 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 621.0 1 495.0 2 306.5 3 208.0 4 147.5 5 100.5 6 71.0 7 66.0 8 62.0 9 51.5 10 42.5 11 45.0 12 50.0 13 55.0 14 63.5 15 107.0 16 876.0 17 1022.5 18 484.5 19 653.5 20 950.0 21 1342.0 22 1878.0 23 2644.0 24 3494.5 25 4560.5 26 6195.0 27 8532.5 28 11188.0 29 14187.5 30 18114.0 31 22222.5 32 26394.5 33 32145.0 34 38116.0 35 43392.5 36 48105.5 37 51379.0 38 53891.5 39 56750.0 40 58022.0 41 57306.0 42 56751.0 43 57469.5 44 58845.0 45 60572.5 46 61995.5 47 63171.5 48 64396.5 49 63437.5 50 60617.0 51 58200.0 52 57970.5 53 57733.5 54 54867.5 55 51350.5 56 47857.5 57 42969.0 58 38692.0 59 35361.5 60 30889.0 61 26250.0 62 21687.0 63 16759.5 64 12581.0 65 9299.5 66 6742.5 67 4853.5 68 3559.0 69 2755.0 70 2222.5 71 1794.0 72 1441.5 73 1108.5 74 809.0 75 618.5 76 474.5 77 333.0 78 223.5 79 123.0 80 51.0 81 14.0 82 4.5 83 2.0 84 1.0 85 0.0 86 0.0 87 0.0 88 0.5 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 1.0 97 1.0 98 1.0 99 2.0 100 5.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05108931822185683 2 0.027188913030712317 3 0.029244230430442185 4 0.03429443889834988 5 0.03740677667508368 6 0.026542956133654358 7 0.015502965529391038 8 0.01468083856949909 9 0.005226378530741677 10-11 0.001791062305478889 12-13 4.1106347994597454E-4 14-15 0.0010276586998649363 16-17 0.0 18-19 5.872335427799636E-5 20-21 0.010687650478595337 22-23 0.021757002759997653 24-25 0.021199130894356686 26-27 0.0 28-29 0.013741264901051148 30-31 0.0 32-33 0.012478712784074227 34-35 5.872335427799636E-4 36-37 0.00549063362499266 38-39 0.021081684185800694 40-41 0.0 42-43 0.00452169827940572 44-45 0.005020846790768688 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.005842973750660637 54-55 0.005931058782077632 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.004668506665100711 66-67 5.285101885019672E-4 68-69 0.0 70-71 0.0 72-73 0.0013506371483939163 74-75 1.7617006283398909E-4 76-77 0.0020553173997298725 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86-87 0.0 88-89 2.936167713899818E-5 90-91 0.0 92-93 0.0 94-95 0.0 96-97 0.0 98-99 0.0 100-101 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1702900.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.16181215484475 #Duplication Level Percentage of deduplicated Percentage of total 1 86.50156301871407 58.96103289582055 2 6.998706655093502 9.540890567026903 3 2.20976496654867 4.518647536687418 4 1.168460027899949 3.18577411728644 5 0.7136484071429587 2.4321784336141263 6 0.4745410338581675 1.9407346085763741 7 0.3363221430806725 1.6047028718125733 8 0.2415992072570026 1.3174271825448975 9 0.19037234786860763 1.1678511793407116 >10 1.1507419138972306 14.14331801290264 >50 0.012635648461727317 0.5180595224225518 >100 0.0012984155487540986 0.23381160818290603 >500 1.731073143414526E-4 0.06831799472564846 >1k 1.7310731434145253E-4 0.3672534690562708 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT 4694 0.27564742498091493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.872335427799636E-5 0.0 0.0 0.0 0.0 2 5.872335427799636E-5 0.0 0.0 0.0 0.0 3 1.1744670855599271E-4 0.0 0.0 0.0 0.0 4 1.7617006283398909E-4 0.0 0.0 0.0 0.0 5 1.7617006283398909E-4 0.0 0.0 0.0 0.0 6 1.7617006283398909E-4 0.0 0.0 0.0 0.0 7 2.3489341711198543E-4 0.0 0.0 0.0 0.0 8 3.5234012566797817E-4 0.0 0.0 0.0 0.0 9 4.6978683422397086E-4 0.0 0.0 0.0 5.872335427799636E-5 10-11 0.0015855305655059016 0.0 0.0 0.0 5.872335427799636E-5 12-13 0.0030242527453168125 0.0 0.0 0.0 5.872335427799636E-5 14-15 0.004697868342239709 0.0 0.0 0.0 5.872335427799636E-5 16-17 0.005872335427799636 0.0 0.0 0.0 1.1744670855599271E-4 18-19 0.006988079159081567 2.936167713899818E-5 0.0 0.0 1.1744670855599271E-4 20-21 0.008602971401726466 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 22-23 0.00983616184156439 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 24-25 0.011216160667097304 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 26-27 0.013418286452522167 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 28-29 0.015591050560808034 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 30-31 0.01752892125198191 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 32-33 0.01981913206882377 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 34-35 0.0225497680427506 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 36-37 0.026689764519349346 5.872335427799636E-5 0.0 0.0 1.1744670855599271E-4 38-39 0.03182805801867403 8.808503141699453E-5 0.0 0.0 1.1744670855599271E-4 40-41 0.038375712020670624 1.1744670855599271E-4 0.0 0.0 1.7617006283398909E-4 42-43 0.046127194785366143 1.1744670855599271E-4 0.0 0.0 1.7617006283398909E-4 44-45 0.056227611721181514 1.1744670855599271E-4 0.0 0.0 2.0553173997298724E-4 46-47 0.06826589934817076 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 48-49 0.08306418462622585 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 50-51 0.10270714663221563 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 52-53 0.12496329790357624 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 54-55 0.1499500851488637 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 56-57 0.1803981443420048 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 58-59 0.2146044982089377 1.1744670855599271E-4 0.0 0.0 2.3489341711198543E-4 60-61 0.25441893240941926 1.1744670855599271E-4 0.0 0.0 2.936167713899818E-4 62-63 0.30054612719478535 1.1744670855599271E-4 0.0 0.0 2.936167713899818E-4 64-65 0.3520465088965882 1.1744670855599271E-4 0.0 0.0 3.817018028069763E-4 66-67 0.4083915673263257 1.1744670855599271E-4 0.0 0.0 4.110634799459745E-4 68-69 0.47345704386634563 1.1744670855599271E-4 0.0 0.0 4.110634799459745E-4 70-71 0.547595278642316 1.1744670855599271E-4 0.0 0.0 4.404251570849727E-4 72-73 0.629719889600094 1.1744670855599271E-4 0.0 0.0 4.6978683422397086E-4 74-75 0.7230606612249691 1.7617006283398909E-4 0.0 0.0 4.6978683422397086E-4 76-77 0.8296729109166716 1.7617006283398909E-4 0.0 0.0 4.6978683422397086E-4 78-79 0.9461800458042163 1.7617006283398909E-4 0.0 0.0 4.6978683422397086E-4 80-81 1.0686769628281167 1.7617006283398909E-4 0.0 0.0 4.99148511362969E-4 82-83 1.207968759175524 1.7617006283398909E-4 0.0 0.0 5.872335427799636E-4 84-85 1.3605907569440365 1.7617006283398909E-4 0.0 0.0 5.872335427799636E-4 86-87 1.5277761465734923 1.7617006283398909E-4 0.0 0.0 5.872335427799636E-4 88-89 1.7068823771213812 1.7617006283398909E-4 0.0 0.0 6.753185741969582E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 7910 0.0 91.12586 1 TCGACGG 8485 0.0 85.106064 2 TATCTCG 2260 0.0 83.664925 2 CGACGGC 8870 0.0 81.46563 3 ACGGCGC 9015 0.0 80.31341 5 GACGGCG 9080 0.0 79.68615 4 ATATCTC 2375 0.0 79.425415 1 CGGCGCG 9140 0.0 79.312 6 ATCTCGA 2515 0.0 75.370895 3 TCTCGAG 1950 0.0 72.84595 4 AGGGCGC 2030 0.0 70.42048 9 CTCGAGG 2045 0.0 69.46191 5 TCGAGGG 2070 0.0 68.84643 6 CGAGGGC 2065 0.0 68.77703 7 CGCGCCG 10945 0.0 66.60719 9 GCGCGCC 11260 0.0 64.79173 8 GGCGCGC 11265 0.0 64.68245 7 CTCGACG 775 0.0 61.913944 5 GAGGGCG 2325 0.0 61.8994 8 TCTCGAC 925 0.0 51.873848 4 >>END_MODULE