##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2048257_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3431836 Sequences flagged as poor quality 0 Sequence length 101 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30063470398935 33.0 31.0 34.0 30.0 34.0 2 32.43376052934931 34.0 31.0 34.0 31.0 34.0 3 32.512691748673305 34.0 31.0 34.0 31.0 34.0 4 36.06216992886606 37.0 35.0 37.0 35.0 37.0 5 35.92134152098177 37.0 35.0 37.0 35.0 37.0 6 35.909860494499156 37.0 35.0 37.0 35.0 37.0 7 35.885270741375756 37.0 35.0 37.0 35.0 37.0 8 35.854766078565525 37.0 35.0 37.0 35.0 37.0 9 37.45628928655099 39.0 37.0 39.0 34.0 39.0 10-11 37.45756236603381 39.0 37.0 39.0 34.0 39.0 12-13 37.46000639307939 39.0 37.0 39.0 34.0 39.0 14-15 38.80310408189669 40.0 38.0 41.0 35.0 41.0 16-17 38.81367437138604 40.0 38.0 41.0 35.0 41.0 18-19 38.85388316924235 40.0 38.0 41.0 35.0 41.0 20-21 38.88121780877641 40.0 38.0 41.0 35.0 41.0 22-23 38.86188631974255 40.0 38.0 41.0 35.0 41.0 24-25 38.84700521819808 40.0 38.0 41.0 35.0 41.0 26-27 38.75550492506052 40.0 38.0 41.0 34.5 41.0 28-29 38.66137965217452 40.0 38.0 41.0 34.0 41.0 30-31 38.531274513117765 40.0 38.0 41.0 34.0 41.0 32-33 38.44194390407933 40.0 38.0 41.0 34.0 41.0 34-35 38.39930623141665 40.0 38.0 41.0 34.0 41.0 36-37 38.317852309958866 40.0 38.0 41.0 34.0 41.0 38-39 38.226284414523306 40.0 38.0 41.0 33.5 41.0 40-41 38.0902340613013 40.0 37.0 41.0 33.0 41.0 42-43 38.019355674338755 40.0 37.0 41.0 33.0 41.0 44-45 37.908096715577315 40.0 37.0 41.0 33.0 41.0 46-47 37.797174457054474 40.0 37.0 41.0 33.0 41.0 48-49 37.69598372416397 40.0 37.0 41.0 33.0 41.0 50-51 37.604269259952986 40.0 36.0 41.0 32.5 41.0 52-53 37.578423765005084 40.0 36.0 41.0 32.5 41.0 54-55 37.40872830170206 39.0 36.0 41.0 32.0 41.0 56-57 37.17737648302541 39.0 35.5 41.0 32.0 41.0 58-59 36.93621169543067 39.0 35.0 41.0 31.5 41.0 60-61 36.67045278387428 38.5 35.0 40.5 31.0 41.0 62-63 36.36252446212465 38.0 35.0 40.0 31.0 41.0 64-65 36.04679521399041 37.0 35.0 40.0 31.0 41.0 66-67 35.707587134117134 37.0 35.0 40.0 30.5 41.0 68-69 35.348380720990164 36.0 34.0 39.0 30.0 41.0 70-71 34.9926163429721 36.0 34.0 39.0 30.0 41.0 72-73 34.620485652577806 35.5 34.0 38.5 29.5 40.0 74-75 34.28442195372972 35.0 34.0 37.0 29.0 39.5 76-77 34.03983203160058 35.0 34.0 37.0 29.5 39.0 78-79 33.88432751448496 35.0 34.0 36.5 30.0 39.0 80-81 33.642155394372 35.0 34.0 36.0 30.0 37.5 82-83 33.406989727947376 35.0 34.0 36.0 29.0 37.0 84-85 33.202763622737216 35.0 34.0 35.0 29.0 37.0 86-87 33.006811368608524 35.0 34.0 35.0 29.0 36.0 88-89 32.86790991760678 35.0 34.0 35.0 29.0 36.0 90-91 32.73482809201838 35.0 33.0 35.0 29.0 36.0 92-93 32.6019806890539 35.0 33.0 35.0 29.0 36.0 94-95 32.4910798476384 35.0 33.0 35.0 29.0 35.0 96-97 32.38200266562855 35.0 33.0 35.0 29.0 35.0 98-99 32.24338867008797 35.0 33.0 35.0 29.0 35.0 100-101 31.792766321001352 34.5 32.5 35.0 27.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 7.0 12 25.0 13 151.0 14 492.0 15 1103.0 16 1982.0 17 3033.0 18 5572.0 19 11530.0 20 13057.0 21 11985.0 22 11701.0 23 11910.0 24 13328.0 25 16048.0 26 20386.0 27 26862.0 28 35090.0 29 45304.0 30 59219.0 31 77644.0 32 100927.0 33 133633.0 34 181336.0 35 259361.0 36 426801.0 37 809000.0 38 937977.0 39 216038.0 40 334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.667893221004732 39.140535853111864 14.681703904265822 20.509867021617584 2 23.954262383167492 28.562670244149196 29.43806172556031 18.045005647123 3 22.535371736877867 27.575327026116632 25.00882909323173 24.880472143773773 4 23.508892321676207 26.962244619232205 26.03512967744399 23.493733381647598 5 23.46405830581648 27.602193111792054 25.472312779515104 23.461435802876363 6 23.73583702717729 26.29440917339873 26.078052680839058 23.891701118584923 7 24.142295843973898 27.573462135136996 24.86750532368097 23.41673669720814 8 23.987801281879438 26.018434447333732 26.4068854106082 23.586878860178633 9 23.131962016832972 25.725326035393298 26.776600047321608 24.36611190045212 10-11 23.993017148838113 26.434421691479432 25.83175594637972 23.740805213302735 12-13 23.807198246070033 26.563550822358646 25.686891797859808 23.94235913371152 14-15 23.467147031501508 26.48730883410513 26.016467570128643 24.029076564264727 16-17 23.655471881523475 26.78745429560154 25.88474507523087 23.672328747644116 18-19 23.120895963821102 26.68250367514755 26.572067130267047 23.6245332307643 20-21 22.62662026973317 26.757004122574624 26.896375584381072 23.720000023311137 22-23 22.483339450081292 26.841693560688896 27.40700345544052 23.267963533789292 24-25 22.438441114318984 26.361122734303155 28.306641109889867 22.893795041487998 26-27 22.388276938802985 26.18958259636101 28.80054804515603 22.621592419679974 28-29 22.39779581220637 26.423329120810436 28.685284910591456 22.493590156391736 30-31 22.477854780626867 26.280572014596853 28.62399727492766 22.61757592984862 32-33 22.401484919875227 26.26363155571291 28.725171810416295 22.609711713995573 34-35 22.460309874947406 26.469592369798555 28.56750730512763 22.502590450126405 36-37 22.480826951058695 26.412017708890765 28.424453911033904 22.682701429016632 38-39 22.442566051062794 26.372943209511767 28.56188973037299 22.622601009052453 40-41 22.63133471694787 26.660129828597405 28.031088347114842 22.677447107339884 42-43 22.676895417313794 26.698117330986676 27.848815355072947 22.776171896626582 44-45 22.608536400936995 26.663074793236596 27.97315186310708 22.755236942719332 46-47 22.684790123061077 26.934779013835904 27.69750563292352 22.682925230179503 48-49 22.761580501163298 26.933706466991207 27.488380489099782 22.816332542745712 50-51 22.668236480931377 26.788241312175128 27.734282176396636 22.80924003049686 52-53 22.701661247480722 27.04168686386122 27.53039705098377 22.726254837674293 54-55 22.78622466946296 26.890832701133792 27.435022101365714 22.887920528037533 56-57 22.715028403929505 26.87105995734348 27.58387176060363 22.830039878123387 58-59 22.842350937766852 27.04656292994063 27.313012295455163 22.798073836837354 60-61 22.802528338470065 26.94799754882178 27.275914026934405 22.97356008577375 62-63 22.812722913529367 26.92812918144987 27.347177477632883 22.911970427387885 64-65 22.91314631352553 27.134364794982503 27.117711867345374 22.8347770241466 66-67 22.901662218359043 27.063596836614405 27.02931483047162 23.005426114554933 68-69 22.852865650439817 27.06204083119343 27.058529567101928 23.02656395126482 70-71 22.96116713495526 27.215728668950685 26.874335721034527 22.948768475059534 72-73 22.955447271974958 27.16442308883082 26.744239411451463 23.13589022774276 74-75 22.89532434166214 27.109418059968725 26.95656848851137 23.03868910985777 76-77 22.970226807295973 27.289461077704726 26.742301151694793 22.998010963304516 78-79 22.998624496205892 27.1903342630113 26.721386687320347 23.08965455346246 80-81 22.884634184826165 27.212813667787984 26.835974509850484 23.066577637535364 82-83 22.984510100888684 27.41291803531869 26.655957852438366 22.946614011354256 84-85 22.97196019856427 27.25670748835317 26.6715105267268 23.099821786355758 86-87 22.935047867977335 27.220044087201163 26.794673986365897 23.050234058455608 88-89 22.974488202192187 27.37673901691928 26.633140277589995 23.015632503298537 90-91 23.021972546409668 27.323382756944696 26.53649891544681 23.118145781198823 92-93 22.90696641000051 27.282932550465134 26.724425050811156 23.0856759887232 94-95 23.019748029917515 27.435460202643714 26.509804081547024 23.03498768589175 96-97 22.962669953552343 27.41983845306572 26.488685304007788 23.12880628937415 98-99 22.94541464102597 27.31230455068366 26.658820526388787 23.083460281901583 100-101 23.01109113779929 27.47901915869147 26.384141038229814 23.12574866527943 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1486.0 1 1166.5 2 601.5 3 299.5 4 206.0 5 146.5 6 119.0 7 112.5 8 114.5 9 119.0 10 124.0 11 127.5 12 153.0 13 223.5 14 306.5 15 448.5 16 1927.5 17 2345.5 18 1490.5 19 1783.0 20 2368.0 21 3155.5 22 4272.5 23 5811.5 24 7420.0 25 9576.0 26 12547.0 27 16869.5 28 22030.0 29 27892.0 30 35153.0 31 42213.0 32 49216.5 33 59573.0 34 70599.0 35 81038.5 36 91144.0 37 98421.0 38 103501.0 39 109379.0 40 113713.0 41 113971.5 42 113932.5 43 116624.5 44 120072.0 45 123987.0 46 127320.0 47 130057.0 48 132501.0 49 130571.0 50 125640.0 51 121279.5 52 120504.5 53 119387.0 54 113493.5 55 106084.5 56 98019.5 57 88275.0 58 80012.5 59 73008.5 60 64043.5 61 54413.0 62 44917.0 63 34711.5 64 25926.0 65 18970.5 66 13635.5 67 9957.0 68 7372.0 69 5631.5 70 4402.0 71 3571.5 72 3067.5 73 2376.0 74 1712.0 75 1334.5 76 1034.5 77 742.5 78 481.0 79 230.5 80 60.5 81 23.0 82 19.0 83 8.5 84 1.5 85 1.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.044203744001753 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 2.9138921556857614E-5 20-21 0.0 22-23 4.370838233528642E-5 24-25 0.0 26-27 5.827784311371523E-5 28-29 1.4569460778428804E-4 30-31 1.4569460778428807E-5 32-33 2.9138921556857614E-5 34-35 0.0 36-37 1.4569460778428807E-5 38-39 7.284730389214402E-5 40-41 1.0198622544900164E-4 42-43 1.7483352934114568E-4 44-45 4.3708382335286413E-4 46-47 1.0198622544900164E-4 48-49 1.4569460778428807E-5 50-51 2.1854191167643207E-4 52-53 0.0013840987739507367 54-55 0.0010052927937115876 56-57 1.3112514700585926E-4 58-59 0.0011509874014958756 60-61 4.953616664665793E-4 62-63 3.4966705868229135E-4 64-65 2.0397245089800328E-4 66-67 1.894029901195745E-4 68-69 6.847646565861539E-4 70-71 3.9337544101757777E-4 72-73 1.0198622544900164E-4 74-75 8.887371074841571E-4 76-77 6.993341173645827E-4 78-79 7.284730389214402E-5 80-81 1.4569460778428807E-5 82-83 0.0024330999499976107 84-85 0.0 86-87 2.9138921556857614E-5 88-89 3.4966705868229135E-4 90-91 2.331113724548609E-4 92-93 3.205281371254337E-4 94-95 0.0 96-97 4.662227449097218E-4 98-99 0.0 100-101 0.009105912986518003 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3431836.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.335994772823376 #Duplication Level Percentage of deduplicated Percentage of total 1 84.03453705378682 49.86272851360127 2 8.221226558764801 9.756293122341301 3 2.498159979024873 4.446924223712892 4 1.2442969173093823 2.9532638152523893 5 0.7552345110881125 2.240629550109003 6 0.5426910488187764 1.9320667941581369 7 0.4337971787331565 1.8017850990843267 8 0.3403543405711032 1.6156210698427782 9 0.25731091614719265 1.3741019257950196 >10 1.5446301411477856 17.640895985116423 >50 0.11898570635560969 4.590008548462098 >100 0.008283768289422667 0.6353077954490416 >500 4.9187996296948135E-5 0.021014054576361865 >1k 3.4431597406460663E-4 0.4391061820673352 >5k 4.9187996294943804E-5 0.24385059163659595 >10k+ 4.9187996294943804E-5 0.4464027287949413 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15295 0.4456798052121372 No Hit ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT 8355 0.24345568960754535 No Hit CTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4423 0.12888145004598123 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9138921556857614E-5 0.0 0.0 0.0 0.0 2 2.9138921556857614E-5 0.0 0.0 0.0 0.0 3 2.9138921556857614E-5 0.0 0.0 0.0 0.0 4 1.1655568622743045E-4 0.0 0.0 0.0 2.9138921556857614E-5 5 1.7483352934114568E-4 0.0 0.0 0.0 2.9138921556857614E-5 6 3.205281371254337E-4 0.0 0.0 0.0 2.9138921556857614E-5 7 5.24500588023437E-4 0.0 0.0 0.0 2.9138921556857614E-5 8 0.0013986682347291654 0.0 0.0 0.0 2.9138921556857614E-5 9 0.0038754765670620623 0.0 0.0 0.0 2.9138921556857614E-5 10-11 0.013025097935915352 0.0 0.0 0.0 2.9138921556857614E-5 12-13 0.02318001209848023 0.0 0.0 0.0 5.827784311371523E-5 14-15 0.0330289675846981 0.0 0.0 0.0 5.827784311371523E-5 16-17 0.04254282547301211 0.0 0.0 0.0 8.741676467057284E-5 18-19 0.04955073610743637 0.0 0.0 0.0 8.741676467057284E-5 20-21 0.058904329927187665 0.0 0.0 0.0 8.741676467057284E-5 22-23 0.06873871595262711 0.0 0.0 0.0 8.741676467057284E-5 24-25 0.07946183908555071 0.0 0.0 0.0 8.741676467057284E-5 26-27 0.09464321721667353 0.0 0.0 0.0 8.741676467057284E-5 28-29 0.10832394088761817 0.0 0.0 0.0 8.741676467057284E-5 30-31 0.1201252041181455 1.4569460778428807E-5 0.0 0.0 1.1655568622743045E-4 32-33 0.13338341342651572 2.9138921556857614E-5 0.0 0.0 1.7483352934114568E-4 34-35 0.14702042871512508 2.9138921556857614E-5 0.0 2.9138921556857614E-5 1.7483352934114568E-4 36-37 0.1612402224348716 4.370838233528642E-5 0.0 2.9138921556857614E-5 2.0397245089800328E-4 38-39 0.175795113752522 5.827784311371523E-5 0.0 2.9138921556857614E-5 2.3311137245486088E-4 40-41 0.19266654933394253 5.827784311371523E-5 0.0 2.9138921556857614E-5 3.0595867634700493E-4 42-43 0.21189823756146856 5.827784311371523E-5 0.0 2.9138921556857614E-5 3.205281371254337E-4 44-45 0.23451004068959005 5.827784311371523E-5 0.0 2.9138921556857614E-5 3.205281371254337E-4 46-47 0.2594675270030386 5.827784311371523E-5 0.0 2.9138921556857614E-5 3.205281371254337E-4 48-49 0.2866832797371436 5.827784311371523E-5 0.0 4.370838233528642E-5 3.205281371254337E-4 50-51 0.3178764952637597 5.827784311371523E-5 0.0 5.827784311371523E-5 3.205281371254337E-4 52-53 0.35287234005354573 5.827784311371523E-5 0.0 5.827784311371523E-5 3.4966705868229135E-4 54-55 0.38944168660740197 5.827784311371523E-5 0.0 5.827784311371523E-5 3.642365194607202E-4 56-57 0.43393681982472354 5.827784311371523E-5 0.0 5.827784311371523E-5 4.0794490179600656E-4 58-59 0.48264252720701106 5.827784311371523E-5 0.0 5.827784311371523E-5 4.0794490179600656E-4 60-61 0.5363455596362996 5.827784311371523E-5 0.0 5.827784311371523E-5 4.2251436257443535E-4 62-63 0.5965174326512106 5.827784311371523E-5 0.0 5.827784311371523E-5 4.370838233528642E-4 64-65 0.6629687432616244 5.827784311371523E-5 0.0 1.0198622544900165E-4 4.662227449097218E-4 66-67 0.7346067819091588 7.284730389214404E-5 0.0 1.3112514700585926E-4 4.662227449097218E-4 68-69 0.8143891491318349 1.1655568622743045E-4 0.0 1.4569460778428807E-4 5.099311272450083E-4 70-71 0.9026800814491136 1.1655568622743045E-4 0.0 1.4569460778428807E-4 5.24500588023437E-4 72-73 1.000106065674467 1.1655568622743045E-4 0.0 1.4569460778428807E-4 5.24500588023437E-4 74-75 1.1098432442575927 1.1655568622743045E-4 0.0 1.602640685627169E-4 5.390700488018658E-4 76-77 1.2279287238667582 1.1655568622743045E-4 0.0 1.7483352934114568E-4 5.536395095802946E-4 78-79 1.3562565344031592 1.1655568622743045E-4 0.0 1.7483352934114568E-4 5.536395095802946E-4 80-81 1.4927141040539234 1.1655568622743045E-4 0.0 1.7483352934114568E-4 5.827784311371523E-4 82-83 1.6435371620322183 1.1655568622743045E-4 0.0 1.7483352934114568E-4 6.264868134724386E-4 84-85 1.8064674419173876 1.1655568622743045E-4 0.0 1.7483352934114568E-4 6.410562742508674E-4 86-87 1.9814758047878747 1.3112514700585926E-4 0.0 1.8940299011957446E-4 6.410562742508674E-4 88-89 2.1700337661823 1.4569460778428807E-4 0.0 2.0397245089800328E-4 6.556257350292963E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 2825 0.0 72.832565 1 TCGACGG 3450 0.0 62.25518 2 ATATCTC 2540 0.0 58.74246 1 TATCTCG 2540 0.0 58.368305 2 CGACGGC 4155 0.0 51.806393 3 ACGGCGC 4645 0.0 46.22086 5 ATCTCGA 5445 0.0 45.990578 1 GACGGCG 4710 0.0 45.60093 4 TCTCGAG 5210 0.0 44.05199 2 CGGCGCG 4885 0.0 43.950027 6 CTCGAGG 5905 0.0 38.6258 3 TCGAGGG 5990 0.0 38.236343 4 CGAGGGC 6125 0.0 37.378876 5 GGGCGCG 6345 0.0 36.08284 8 AGGGCGC 6430 0.0 35.53198 7 GAGGGCG 6880 0.0 33.553135 6 GGTCGAC 420 0.0 30.547148 1 CGCGCCG 10885 0.0 25.309574 9 GCGCGCC 11410 0.0 24.186653 8 GGCGCGC 11580 0.0 23.708527 7 >>END_MODULE