Basic Statistics
Measure | Value |
---|---|
Filename | SRR1567927_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15126640 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 34571 | 0.22854381409222405 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 30205 | 0.19968082799617098 | No Hit |
CTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 18280 | 0.12084640078695598 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGACG | 4190 | 0.0 | 84.294815 | 1 |
TCGACGG | 5185 | 0.0 | 68.70497 | 2 |
CGACGGC | 7710 | 0.0 | 47.374825 | 3 |
ATCTCGA | 9610 | 0.0 | 41.84784 | 1 |
ACGGCGC | 10965 | 0.0 | 34.740925 | 5 |
CGGCGCG | 11160 | 0.0 | 34.09133 | 6 |
TCTCGAG | 11845 | 0.0 | 33.523308 | 2 |
GACGGCG | 11245 | 0.0 | 32.65094 | 4 |
TATCTCG | 4325 | 0.0 | 32.28768 | 2 |
TCGAGGG | 13895 | 0.0 | 29.12438 | 4 |
CTCGAGG | 14360 | 0.0 | 28.115131 | 3 |
GGGCGCG | 15185 | 0.0 | 26.712759 | 8 |
CGAGGGC | 15685 | 0.0 | 26.13376 | 5 |
AGGGCGC | 15980 | 0.0 | 25.532423 | 7 |
ATATCTC | 5580 | 0.0 | 25.216429 | 1 |
CGCGCCG | 24520 | 0.0 | 24.039585 | 9 |
GGCGCGC | 26125 | 0.0 | 22.689972 | 7 |
GCGCGCC | 26435 | 0.0 | 22.405922 | 8 |
GAGGGCG | 18970 | 0.0 | 21.783495 | 6 |
GCCGGAT | 25120 | 0.0 | 15.174035 | 12-13 |