SRR1051294_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1051294_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4609469
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT	126329	2.740641058655563	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTAA	13941	0.30244264577980673	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	13103	0.28426267754485385	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTA	11374	0.24675293401474227	No Hit
GTCGACGGCGCGCCGGATCCATATTTTTTTTTTTTTTTTTTTTTTTTTTT	10747	0.23315049954777872	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTAC	9421	0.2043836285697984	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTC	9118	0.19781020330107438	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTAT	7727	0.16763319158887932	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTCC	7545	0.1636847975330781	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTG	7144	0.15498531392661496	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTAAA	6059	0.13144681090164614	No Hit
ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5085	0.1103163943612594	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTAG	4654	0.10096607656977408	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGACG	90260	94.15162	1
TCGACGG	92555	91.82729	2
ATATCTC	40935	90.10216	1
CGACGGC	94845	89.535034	3
TATCTCG	41425	88.82997	2
GACGGCG	95775	88.65571	4
ACGGCGC	95895	88.515045	5
CGGCGCG	96865	87.62376	6
ATCTCGA	43935	83.67945	3
TCTCGAG	42985	82.35741	4
CTCGAGG	44675	79.42268	5
TCGAGGG	45435	78.0837	6
AGGGCGC	46760	76.25712	9
CGAGGGC	47330	75.18821	7
GAGGGCG	48010	74.2321	8
CTCGACG	2030	64.81451	5
CGCGCCG	143810	59.99443	9
GGCGCGC	143945	59.948063	7
GCGCGCC	144000	59.921864	8
TCTCGAC	2230	59.214546	4