SRR1051290_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1051290_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15476735
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT	1691478	10.929165615357503	No Hit
GTCGACGGCGCGCCGGATCCATATTTTTTTTTTTTTTTTTTTTTTTTTTT	118020	0.7625639387118794	No Hit
GTCGACGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	22092	0.1427432853247148	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTA	19132	0.1236178044012513	No Hit
ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18538	0.11977978559431302	No Hit
TATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTT	16860	0.1089377055302685	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGACG	122295	94.2896	1
ATATCTC	203750	92.9009	1
TATCTCG	203800	92.79188	2
TCGACGG	126410	91.21269	2
ATCTCGA	207325	91.12486	3
CGACGGC	126985	90.68373	3
TCTCGAG	205605	90.24947	4
CTCGAGG	206080	90.08524	5
GACGGCG	127965	90.02636	4
ACGGCGC	128045	89.93302	5
TCGAGGG	206835	89.76788	6
CGAGGGC	207695	89.35274	7
CGGCGCG	129155	89.24836	6
AGGGCGC	208315	89.18711	9
GAGGGCG	210250	88.427284	8
CTCGACG	4275	78.09856	5
TCTCGAC	6185	54.441532	4
GGGCGCG	208865	44.5398	10-11
GGATCCT	212115	43.246117	18-19
GATCCTT	209560	43.17735	20-21