##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1051283_1.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12655055 Sequences flagged as poor quality 0 Sequence length 101 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.522302352696215 34.0 31.0 34.0 31.0 34.0 2 32.77581962306762 34.0 31.0 34.0 31.0 34.0 3 32.85248013540834 34.0 31.0 34.0 31.0 34.0 4 36.31317682933816 37.0 37.0 37.0 35.0 37.0 5 36.18066954272423 37.0 35.0 37.0 35.0 37.0 6 36.137677868646165 37.0 36.0 37.0 35.0 37.0 7 36.10741083306236 37.0 36.0 37.0 35.0 37.0 8 36.086345258870864 37.0 36.0 37.0 35.0 37.0 9 37.79725927702408 39.0 38.0 39.0 35.0 39.0 10-11 37.7827431014721 39.0 38.0 39.0 35.0 39.0 12-13 37.78005429450919 39.0 38.0 39.0 35.0 39.0 14-15 39.221892832547944 40.0 39.0 41.0 36.0 41.0 16-17 39.226095500967794 40.0 39.0 41.0 36.0 41.0 18-19 39.29351595074063 41.0 39.0 41.0 36.0 41.0 20-21 39.34337460406138 41.0 39.0 41.0 36.0 41.0 22-23 39.315541813133166 41.0 39.0 41.0 36.0 41.0 24-25 39.27204061934144 41.0 39.0 41.0 36.0 41.0 26-27 39.15604266437404 40.0 39.0 41.0 36.0 41.0 28-29 39.02544809169142 40.0 38.5 41.0 35.5 41.0 30-31 38.929258782360094 40.0 38.0 41.0 35.0 41.0 32-33 38.91445374990468 40.0 38.0 41.0 35.0 41.0 34-35 38.858893422430796 40.0 38.0 41.0 35.0 41.0 36-37 38.80332183463446 40.0 38.0 41.0 35.0 41.0 38-39 38.730541945491346 40.0 38.0 41.0 35.0 41.0 40-41 38.743927150059804 40.0 38.0 41.0 35.0 41.0 42-43 38.73242565915359 40.0 38.0 41.0 35.0 41.0 44-45 38.67461330669839 40.0 38.0 41.0 35.0 41.0 46-47 38.57609307110874 40.0 38.0 41.0 34.5 41.0 48-49 38.51824756984462 40.0 38.0 41.0 34.0 41.0 50-51 38.4830292717021 40.0 38.0 41.0 34.0 41.0 52-53 38.33829596157425 40.0 38.0 41.0 34.0 41.0 54-55 38.19219738673597 40.0 37.0 41.0 34.0 41.0 56-57 38.04925604827478 40.0 37.0 41.0 34.0 41.0 58-59 37.84292743097521 40.0 37.0 41.0 33.5 41.0 60-61 37.577555648711126 39.0 36.0 41.0 33.0 41.0 62-63 37.28206380770372 39.0 35.5 41.0 33.0 41.0 64-65 36.9755732393103 39.0 35.0 40.5 32.5 41.0 66-67 36.59898633391953 38.0 35.0 40.0 32.0 41.0 68-69 36.208122090342556 37.0 35.0 40.0 32.0 41.0 70-71 35.86525874443059 37.0 35.0 39.0 32.0 41.0 72-73 35.46365890942394 36.0 35.0 39.0 31.0 40.5 74-75 35.078746319158626 36.0 35.0 38.5 31.0 39.5 76-77 34.46373638834442 35.0 34.0 37.0 30.5 39.0 78-79 34.36706454456342 35.0 34.0 37.0 31.0 39.0 80-81 34.11800687551338 35.0 34.0 36.0 31.0 38.0 82-83 33.85455057287384 35.0 34.0 36.0 31.0 37.0 84-85 33.611608009605646 35.0 34.0 35.5 30.0 37.0 86-87 33.41010070679266 35.0 34.0 35.0 30.0 36.0 88-89 33.22447764944522 35.0 34.0 35.0 30.0 36.0 90-91 33.075321047597185 35.0 34.0 35.0 30.0 36.0 92-93 32.93263470605224 35.0 34.0 35.0 30.0 36.0 94-95 32.795163513710534 35.0 34.0 35.0 30.0 35.0 96-97 32.65806241063354 35.0 34.0 35.0 29.0 35.0 98-99 32.48523783578973 35.0 34.0 35.0 29.0 35.0 100-101 31.604536369063588 34.5 32.5 35.0 26.5 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 40.0 12 164.0 13 575.0 14 1753.0 15 3786.0 16 6291.0 17 10635.0 18 19498.0 19 34287.0 20 32342.0 21 29221.0 22 28359.0 23 30113.0 24 35346.0 25 43854.0 26 56788.0 27 73855.0 28 95893.0 29 121402.0 30 154228.0 31 199109.0 32 260841.0 33 352791.0 34 511185.0 35 803991.0 36 1414336.0 37 3091890.0 38 4367990.0 39 873993.0 40 499.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 22.998612200376275 29.38649290102327 24.842222330324788 22.772672568275667 2 24.021257726424 28.161975385283057 26.531217001123764 21.285549887169182 3 23.1121472957706 26.61412236912714 26.85985185428685 23.41387848081541 4 24.271551744233875 26.564964107326457 26.639852622058125 22.52363152638155 5 24.393520411380575 27.472608317791085 25.618364450229535 22.515506820598805 6 24.351913128785295 26.620777230916815 25.061566306902655 23.96574333339523 7 24.44569383538831 26.768994682362106 25.660267774418998 23.125043707830585 8 23.99814145414619 26.52016921301409 25.808603755574357 23.67308557726537 9 23.491458551543236 26.209826824142606 26.192244917149708 24.10646970716445 10-11 23.75149298047302 26.531789075590744 26.06157776477463 23.655140179161606 12-13 23.60759472665603 26.41402511125208 26.297664393738973 23.68071576835292 14-15 23.481130662806287 26.53045364085735 26.308799132046445 23.679616564289923 16-17 23.553792542840252 26.684291613601257 26.29444110495956 23.467474738598934 18-19 23.19712557551113 26.513112744274913 26.686083150172006 23.603678530041947 20-21 23.016024031503616 26.570967095757386 26.705822297888076 23.70718657485092 22-23 23.0018360252089 26.476494965845664 27.158416142798274 23.363252866147164 24-25 23.006063584867864 26.203224719292013 27.58468453910315 23.206027156736972 26-27 23.03525350146641 26.23668170545288 27.6754071791865 23.052657613894212 28-29 22.99814580023556 26.352125692065343 27.645411260559516 23.004317247139582 30-31 23.04990890188626 26.28012861598113 27.626387026762544 23.043575455370064 32-33 23.02466089637698 26.299814580023558 27.64679805816727 23.028726465432193 34-35 23.033590134535174 26.369802422826293 27.621954230937757 22.97465321170078 36-37 23.02640328311493 26.391852899888622 27.536217740657786 23.045526076338664 38-39 23.0652612730644 26.416870570692897 27.483337686007687 23.03453047023502 40-41 23.139319806535006 26.557236950368047 27.210792728014077 23.09265051508287 42-43 23.116091081580432 26.600458844474783 27.14678617837203 23.13666389557276 44-45 23.10617127958402 26.68042807746611 27.127075348564127 23.086325294385734 46-47 23.15271264886078 26.81087890039604 26.94097737745208 23.0954310732911 48-49 23.16494080823829 26.81049193385568 26.855786087061652 23.168781170844376 50-51 23.153644926869145 26.854059504285043 26.863936980123754 23.128358588722055 52-53 23.165596672633978 26.850452250108752 26.85019148474661 23.13375959251066 54-55 23.158049116688385 26.84238944351609 26.849042915447097 23.150518524348428 56-57 23.149275461208155 26.847688201639336 26.858976185041694 23.14406015211081 58-59 23.169072676052064 26.929164794225606 26.82955632965151 23.07220620007082 60-61 23.152159354503002 26.87176784296868 26.820954156264037 23.15511864626428 62-63 23.169816330312273 26.93166880744493 26.816979459986545 23.081535402256254 64-65 23.125577091525876 26.97729089284875 26.824225576261817 23.072906439363557 66-67 23.136343540190065 26.96262876771377 26.786841305707483 23.11418638638868 68-69 23.11739310290876 27.02168976878391 26.767767321254095 23.093149807053234 70-71 23.089024353432233 27.109694672183938 26.7798699239055 23.02141105047833 72-73 23.09236008428037 27.060865100201468 26.75848034880391 23.08829446671425 74-75 23.07385040112901 27.116839524333862 26.76661739616341 23.042692678373715 76-77 23.087932095191235 27.177166480989207 26.713923051578902 23.020978372240652 78-79 23.054474658207084 27.162493037827872 26.71434191456978 23.068690389395268 80-81 23.02970218243298 27.186995462488696 26.753691046934634 23.02961130814369 82-83 23.027999257052343 27.27508458813086 26.72065140436823 22.976264750448568 84-85 23.00091907951709 27.24657889619269 26.75046086334052 23.0020411609497 86-87 22.97642229595476 27.327428759857035 26.744886566618586 22.951262377569616 88-89 23.01601688246769 27.388462856880057 26.701221854849404 22.89429840580285 90-91 22.992165052466685 27.3651375237697 26.672492018095095 22.97020540566852 92-93 22.976029721727436 27.418820623604873 26.664698799117453 22.94045085555024 94-95 22.992363546925514 27.48522147294349 26.628350393774674 22.894064586356322 96-97 22.938920639074823 27.492531831576407 26.634012493358377 22.934535035990393 98-99 22.96721985481251 27.554777590139256 26.589404127887693 22.888598427160538 100-101 22.9764977774041 27.620086891968686 26.493346317490456 22.91006901313676 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 27009.0 1 15175.5 2 2384.0 3 1226.5 4 941.0 5 823.0 6 772.0 7 714.0 8 669.5 9 685.0 10 724.5 11 797.5 12 989.0 13 1417.5 14 1894.0 15 2252.0 16 5491.0 17 6050.5 18 3679.0 19 4266.0 20 5672.5 21 7823.0 22 10628.5 23 14541.0 24 19679.5 25 25879.5 26 33471.5 27 42925.0 28 54820.5 29 70028.0 30 88737.5 31 109859.0 32 134452.0 33 167841.5 34 205581.0 35 242902.0 36 283372.5 37 322898.5 38 353035.0 39 377914.5 40 402422.0 41 424248.0 42 448989.5 43 482347.0 44 520795.5 45 551679.0 46 559732.5 47 553194.0 48 547718.0 49 542032.5 50 528259.0 51 508162.0 52 487221.0 53 465727.0 54 437584.0 55 403066.0 56 366069.5 57 325145.5 58 286106.0 59 244957.0 60 202200.5 61 166267.0 62 135726.5 63 106681.5 64 81437.5 65 61664.5 66 45605.0 67 33222.5 68 24467.5 69 18507.5 70 14322.0 71 11120.5 72 8803.5 73 6744.5 74 4927.0 75 3709.5 76 2766.0 77 1911.0 78 1225.5 79 714.0 80 406.5 81 264.5 82 160.5 83 94.5 84 62.5 85 40.0 86 16.5 87 5.0 88 3.0 89 3.0 90 1.0 91 0.0 92 0.0 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.10067123374809513 2 0.0021177308198186418 3 6.479624150191367E-4 4 0.0019280832837154796 5 0.002378496181960489 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 8.692178738061588E-5 14-15 0.0 16-17 6.005505309933461E-4 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 1.4223565207737145E-4 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 4.1485398522566675E-4 42-43 3.555891301934286E-5 44-45 8.099530187739208E-4 46-47 2.0545149744509208E-4 48-49 0.0 50-51 0.0 52-53 0.0 54-55 6.321584536772065E-5 56-57 3.555891301934286E-5 58-59 4.741188402579048E-5 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 7.901980670965082E-5 70-71 7.90198067096508E-6 72-73 0.0011931990813157272 74-75 6.835213280384795E-4 76-77 3.5954012052891117E-4 78-79 4.780698305933874E-4 80-81 0.0016633669312381494 82-83 4.6226586925145717E-4 84-85 1.580396134193016E-5 86-87 4.741188402579048E-5 88-89 2.6076536214184764E-4 90-91 1.9359852643864448E-4 92-93 5.570896373030382E-4 94-95 0.002311329346257286 96-97 8.692178738061588E-5 98-99 8.534139124642288E-4 100-101 0.0011497381876254193 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.2655055E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.03156060105946 #Duplication Level Percentage of deduplicated Percentage of total 1 78.42237351199238 46.29395094452098 2 12.387371278188542 14.624917165924206 3 4.016708874719818 7.113377800645089 4 1.7774588245858387 4.197046732777075 5 0.9635937749456076 2.844122216025265 6 0.5835792434291975 2.0669756084406665 7 0.3688123279588342 1.5240097101823817 8 0.2587807044245838 1.222098306849974 9 0.17864228151177583 0.9490979400276529 >10 0.8884378640871082 9.631179074991463 >50 0.10434248351194073 4.422401812280075 >100 0.049549220123712934 4.4437168547132915 >500 2.158372755969994E-4 0.07856318521587813 >1k 8.026490905750713E-5 0.11581451245947101 >5k 2.6754167969246857E-5 0.11329397554587244 >10k+ 2.6754167969246857E-5 0.3594341594006744 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 31828 0.25150424079547656 No Hit ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13689 0.10817021340484098 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.482376805158096E-5 7.90198067096508E-6 0.0 0.0 7.90198067096508E-6 2 9.482376805158096E-5 7.90198067096508E-6 0.0 7.90198067096508E-6 7.90198067096508E-6 3 1.1062772939351114E-4 7.90198067096508E-6 0.0 1.580396134193016E-5 7.90198067096508E-6 4 1.1062772939351114E-4 7.90198067096508E-6 0.0 1.580396134193016E-5 7.90198067096508E-6 5 1.1062772939351114E-4 7.90198067096508E-6 0.0 1.580396134193016E-5 7.90198067096508E-6 6 1.1852971006447621E-4 7.90198067096508E-6 0.0 1.580396134193016E-5 7.90198067096508E-6 7 1.1852971006447621E-4 1.580396134193016E-5 0.0 1.580396134193016E-5 7.90198067096508E-6 8 1.264316907354413E-4 1.580396134193016E-5 0.0 1.580396134193016E-5 7.90198067096508E-6 9 1.264316907354413E-4 1.580396134193016E-5 0.0 2.370594201289524E-5 1.580396134193016E-5 10-11 1.264316907354413E-4 2.370594201289524E-5 0.0 2.370594201289524E-5 1.97549516774127E-5 12-13 1.3433367140640637E-4 2.370594201289524E-5 0.0 3.95099033548254E-5 3.95099033548254E-5 14-15 1.9359852643864448E-4 2.370594201289524E-5 0.0 4.741188402579049E-5 3.95099033548254E-5 16-17 3.2793219784505085E-4 2.7656932348377784E-5 0.0 5.531386469675557E-5 3.95099033548254E-5 18-19 3.5558913019342864E-4 3.160792268386032E-5 0.0 5.531386469675557E-5 4.741188402579048E-5 20-21 3.990500238837366E-4 4.346089369030794E-5 0.0 5.531386469675557E-5 5.926485503223811E-5 22-23 4.938737919353176E-4 4.741188402579048E-5 0.0 5.531386469675557E-5 7.111782603868573E-5 24-25 5.689426083094858E-4 4.741188402579048E-5 0.0 6.321584536772065E-5 7.111782603868573E-5 26-27 6.914233087094445E-4 4.741188402579048E-5 0.0 6.716683570320319E-5 7.111782603868573E-5 28-29 8.178549994448858E-4 4.741188402579048E-5 0.0 7.111782603868573E-5 7.90198067096508E-5 30-31 9.561396611867748E-4 4.741188402579048E-5 0.0 7.111782603868573E-5 7.90198067096508E-5 32-33 0.001090473332593181 5.531386469675557E-5 0.0 8.692178738061588E-5 9.87747583870635E-5 34-35 0.0012248070039995876 5.531386469675557E-5 0.0 9.482376805158096E-5 1.1062772939351114E-4 36-37 0.0014302585014446796 5.531386469675557E-5 0.0 9.482376805158096E-5 1.2248070039995874E-4 38-39 0.0016041020762059114 5.531386469675557E-5 0.0 9.482376805158096E-5 1.382846617418889E-4 40-41 0.0018530144673413115 5.531386469675557E-5 0.0 9.87747583870635E-5 1.5013763274833653E-4 42-43 0.002026858042102543 5.531386469675557E-5 0.0 1.0272574872254606E-4 1.580396134193016E-4 44-45 0.0022520644912250483 5.531386469675557E-5 0.0 1.1457871972899367E-4 1.7384357476123177E-4 46-47 0.002532584805044308 6.321584536772065E-5 0.0 1.2248070039995874E-4 1.8569654576767937E-4 48-49 0.002990899683960283 7.111782603868573E-5 0.0 1.264316907354413E-4 1.8964753610316193E-4 50-51 0.0034255086208633623 7.111782603868573E-5 0.0 1.3433367140640637E-4 1.9359852643864448E-4 52-53 0.003824558644747099 7.90198067096508E-5 0.0 1.4223565207737145E-4 1.97549516774127E-4 54-55 0.004496227001779131 7.90198067096508E-5 0.0 1.5013763274833653E-4 1.97549516774127E-4 56-57 0.005029610697069274 7.90198067096508E-5 0.0 1.659415940902667E-4 2.0940248778057464E-4 58-59 0.005685475092759375 7.90198067096508E-5 0.0 1.7384357476123177E-4 2.1730446845153974E-4 60-61 0.006669271686294528 7.90198067096508E-5 0.0 1.7779456509671432E-4 2.2125545878702227E-4 62-63 0.007799254922242534 8.692178738061588E-5 0.0 1.8174555543219685E-4 2.2125545878702227E-4 64-65 0.00928482728838397 8.692178738061588E-5 0.0 1.97549516774127E-4 2.4101041046443495E-4 66-67 0.011355146224176821 9.482376805158096E-5 0.0 2.0940248778057464E-4 2.449614007999175E-4 68-69 0.01398255479727271 9.482376805158096E-5 0.0 2.1730446845153974E-4 2.528633814708826E-4 70-71 0.018763253103206583 9.482376805158096E-5 0.0 2.2915743945798735E-4 2.6866734281281275E-4 72-73 0.024440826215294996 9.482376805158096E-5 0.0 2.449614007999175E-4 2.6866734281281275E-4 74-75 0.030047281501344718 1.1852971006447621E-4 0.0 2.449614007999175E-4 2.6866734281281275E-4 76-77 0.036613827438916696 1.1852971006447621E-4 0.0 2.489123911354E-4 2.6866734281281275E-4 78-79 0.045815683930255535 1.2248070039995874E-4 0.0 2.528633814708826E-4 2.7656932348377785E-4 80-81 0.05753037027496127 1.3433367140640637E-4 0.0 2.528633814708826E-4 2.7656932348377785E-4 82-83 0.07335013557823336 1.3433367140640637E-4 0.0 2.568143718063651E-4 2.805203138192604E-4 84-85 0.09389528532274258 1.3433367140640637E-4 0.0 2.6076536214184764E-4 2.884222944902255E-4 86-87 0.12012195916967566 1.3433367140640637E-4 0.0 2.6866734281281275E-4 2.92373284825708E-4 88-89 0.1535828963208773 1.382846617418889E-4 0.0 2.6866734281281275E-4 2.9632427516119054E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 5915 0.0 82.88156 1 TCGACGG 6495 0.0 75.69469 2 CGACGGC 8355 0.0 58.72881 3 ACGGCGC 9245 0.0 53.022243 5 GACGGCG 9640 0.0 50.80078 4 TATCTCG 3900 0.0 48.840935 2 CGGCGCG 10015 0.0 48.802975 6 ATCTCGA 8545 0.0 40.288445 1 TCTCGAG 9820 0.0 34.827732 2 CGCGCCG 22610 0.0 30.272293 9 GGCGCGC 23390 0.0 29.404936 7 GCGCGCC 23570 0.0 29.119919 8 TCGAGGG 12175 0.0 28.44116 4 CTCGAGG 12540 0.0 27.500235 3 CGAGGGC 13250 0.0 26.384401 5 GGGCGCG 13230 0.0 26.13686 8 AGGGCGC 13705 0.0 25.230988 7 ATATCTC 7935 0.0 24.329496 1 GAGGGCG 15445 0.0 22.57304 6 GCCGGAT 23095 0.0 17.410028 12-13 >>END_MODULE