Basic Statistics
Measure | Value |
---|---|
Filename | SRR1051266_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12232916 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 584497 | 4.7780676332609495 | No Hit |
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 114176 | 0.9333506418257103 | No Hit |
ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 48940 | 0.40006814401406826 | No Hit |
CTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 13521 | 0.11052965621606492 | No Hit |
GAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 12767 | 0.10436595820653065 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCGACG | 12155 | 0.0 | 90.74684 | 1 |
TCGACGG | 12455 | 0.0 | 88.7083 | 2 |
ACGGCGC | 15215 | 0.0 | 72.99007 | 5 |
CGACGGC | 15365 | 0.0 | 72.46329 | 3 |
GACGGCG | 15880 | 0.0 | 70.023506 | 4 |
CGGCGCG | 16335 | 0.0 | 67.985535 | 6 |
ATCTCGA | 9790 | 0.0 | 58.98002 | 1 |
TCTCGAG | 12015 | 0.0 | 48.07376 | 2 |
AATTCGA | 5070 | 0.0 | 42.18091 | 1 |
TCGAGGG | 14135 | 0.0 | 40.863045 | 4 |
CTCGAGG | 14385 | 0.0 | 40.41704 | 3 |
CGCGCCG | 32485 | 0.0 | 39.260204 | 9 |
GGCGCGC | 34775 | 0.0 | 36.64753 | 7 |
GCGCGCC | 35030 | 0.0 | 36.434994 | 8 |
CGAGGGC | 15865 | 0.0 | 36.3471 | 5 |
TATCTCG | 3410 | 0.0 | 34.963722 | 2 |
GGGCGCG | 16895 | 0.0 | 34.07498 | 8 |
AGGGCGC | 17110 | 0.0 | 33.730083 | 7 |
CGAGGCG | 3350 | 0.0 | 31.477434 | 5 |
GCGGTAC | 3325 | 0.0 | 31.428396 | 9 |