SRR1051262_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1051262_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4442880
Sequences flagged as poor quality	0
Sequence length	101
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	221246	4.9797878853356385	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	35332	0.7952499279746471	No Hit
ATATGGATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTT	21165	0.4763801858254106	No Hit
ATATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTT	15097	0.3398021103428407	No Hit
GATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9161	0.20619508066839526	No Hit
ATCTCGAGGGCGCGCCGGATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8549	0.1924202319216364	No Hit
AATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7470	0.16813418323249782	No Hit
CCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6010	0.1352726159608182	No Hit
ATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5164	0.11623091328147508	No Hit
CGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4632	0.10425669835782195	No Hit
ATGGATCCGGCGCGCCGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4600	0.10353644482857965	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATCTCG	2280	67.081085	2
ATATGGA	4255	55.933365	1
ATATCTC	2860	54.812637	1
ATCTCGA	3740	47.49841	3
TCTCGAG	4000	47.379128	4
TATGGAT	5230	45.682026	2
GGATCCG	6610	45.629574	5
ATGGATC	6515	42.577236	3
CACTACG	610	42.0473	8
CTCGAGG	4710	41.144657	5
TCGAGGG	4765	40.57006	6
GATCCGG	7475	39.904568	6
ATCCGGC	7835	37.9498	7
TGGATCC	8040	36.273254	4
TCCGGCG	8610	34.589043	8
CGAGGGC	5675	34.14825	7
AGGGCGC	6295	30.935867	9
CCGGCGC	10485	28.31299	9
AATTCCC	2755	28.278414	1
AATTCGA	1100	28.070717	1