Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033288_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10927215 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGATT | 250 | 0.0015659772 | 13.224876 | 1 |
GTCCGAT | 895 | 0.0 | 12.665483 | 1 |
CCCGGAT | 3700 | 0.0 | 11.488791 | 1 |
CTCCGAT | 2130 | 0.0 | 10.2002735 | 1 |
CGTATCG | 905 | 4.9112714E-10 | 9.908208 | 3 |
CCCGTAT | 1390 | 0.0 | 9.854095 | 1 |
GTATCGA | 1060 | 9.094947E-12 | 9.79564 | 4 |
CCCGGTT | 2605 | 0.0 | 9.065585 | 1 |
CTCGGGT | 3040 | 0.0 | 8.855944 | 1 |
CTCGGAT | 3015 | 0.0 | 8.77272 | 1 |
CTCCGTT | 2585 | 0.0 | 8.770296 | 1 |
AGATCGG | 7645 | 0.0 | 8.726399 | 94 |
TCCGATT | 2065 | 0.0 | 8.68847 | 2 |
CGCGTAA | 435 | 0.009429477 | 8.68629 | 1 |
CGGCGAA | 1000 | 2.8017894E-8 | 8.501706 | 1 |
CTCGGTA | 1950 | 0.0 | 8.477484 | 1 |
CCCGTTT | 2290 | 0.0 | 8.45633 | 1 |
CGGGGTT | 3325 | 0.0 | 8.380963 | 1 |
CCGGGAT | 3270 | 0.0 | 8.377488 | 1 |
CTCGAGT | 2050 | 0.0 | 8.294348 | 1 |