Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033286_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11386386 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGTTT | 615 | 5.456968E-12 | 13.8254385 | 1 |
CTCGTAT | 2510 | 0.0 | 13.670326 | 42-43 |
CGTATGC | 2740 | 0.0 | 12.606263 | 44-45 |
TATGCCG | 2880 | 0.0 | 12.073402 | 46-47 |
CGCGAAT | 435 | 5.448317E-6 | 11.944967 | 1 |
TCGTATG | 2360 | 0.0 | 11.153361 | 42-43 |
CGTATCG | 950 | 0.0 | 10.930629 | 3 |
CGCGGAT | 1310 | 0.0 | 10.817614 | 1 |
CGACGGA | 650 | 4.153917E-7 | 10.174105 | 1 |
CTCGCGT | 900 | 4.3655746E-10 | 9.972238 | 1 |
CCGGGTT | 3655 | 0.0 | 9.692937 | 1 |
CCCGGAT | 3915 | 0.0 | 9.411186 | 1 |
CCCGTAT | 1535 | 0.0 | 9.23197 | 1 |
CGGGGTT | 3300 | 0.0 | 9.1610985 | 1 |
TCGCGTC | 825 | 1.1686825E-7 | 9.158268 | 2 |
CTCCGAT | 1965 | 0.0 | 9.134874 | 1 |
ATCTCGT | 3965 | 0.0 | 9.128797 | 40-41 |
GTCCGAT | 835 | 1.3994577E-7 | 9.051385 | 1 |
ATTAGCG | 675 | 7.879222E-6 | 9.048501 | 6 |
CGCCATT | 3055 | 0.0 | 8.968056 | 1 |