Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033277_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4432580 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 6760 | 0.0 | 40.790638 | 1 |
GTATCAA | 11835 | 0.0 | 29.86838 | 1 |
GTGGTAT | 2955 | 0.0 | 27.71374 | 1 |
TGGTATC | 3100 | 0.0 | 24.470528 | 2 |
ATCAACG | 15060 | 0.0 | 23.262215 | 3 |
TCAACGC | 15185 | 0.0 | 23.048018 | 4 |
CAACGCA | 15545 | 0.0 | 22.558619 | 5 |
TATCAAC | 15605 | 0.0 | 22.538174 | 2 |
AACGCAG | 16160 | 0.0 | 21.785458 | 6 |
GTACATG | 13145 | 0.0 | 19.373638 | 1 |
ACGCAGA | 18740 | 0.0 | 18.602182 | 7 |
TACATGG | 12980 | 0.0 | 18.382887 | 2 |
CGCAGAG | 19035 | 0.0 | 18.223316 | 8 |
TCGCGTG | 95 | 0.007861542 | 18.148409 | 12 |
AGAGTAC | 18835 | 0.0 | 17.373716 | 11 |
ACATGGG | 13420 | 0.0 | 17.240597 | 3 |
GAGTACT | 12830 | 0.0 | 17.227549 | 12 |
CAGAGTA | 19425 | 0.0 | 17.094345 | 10 |
GCAGAGT | 20100 | 0.0 | 16.846228 | 9 |
AGTACTT | 13220 | 0.0 | 16.693241 | 13 |