Basic Statistics
Measure | Value |
---|---|
Filename | SRR1033270_1.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3007013 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGTATCA | 5110 | 0.0 | 39.073673 | 1 |
GTATCAA | 8155 | 0.0 | 29.016424 | 1 |
TATACCG | 100 | 1.5717831E-5 | 24.136026 | 5 |
GTGGTAT | 1960 | 0.0 | 23.793316 | 1 |
ATCAACG | 10270 | 0.0 | 22.561428 | 3 |
TCAACGC | 10325 | 0.0 | 22.441246 | 4 |
TATCAAC | 10700 | 0.0 | 21.719202 | 2 |
CAACGCA | 10675 | 0.0 | 21.673166 | 5 |
AACGCAG | 11005 | 0.0 | 21.148592 | 6 |
GTATACG | 95 | 0.007779455 | 18.181248 | 1 |
TGGTATC | 2470 | 0.0 | 18.147388 | 2 |
GTACTAG | 420 | 0.0 | 18.094671 | 1 |
ACGCAGA | 12885 | 0.0 | 18.009363 | 7 |
CGCAGAG | 13185 | 0.0 | 17.625746 | 8 |
TACACCG | 235 | 9.566065E-9 | 17.606829 | 5 |
GAGTACT | 8245 | 0.0 | 17.438951 | 12 |
AGTACTT | 8600 | 0.0 | 16.719088 | 13 |
AGAGTAC | 13165 | 0.0 | 16.683746 | 11 |
GCAGAGT | 13990 | 0.0 | 16.291142 | 9 |
GTACATG | 9950 | 0.0 | 16.248005 | 1 |